Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC007225.2-201ENST00000562529 256 ntBASIC5.18□□□□□ -1.58
P04436 MRPS21P7-201ENST00000566937 238 ntBASIC5.18□□□□□ -1.58
P04436 MIR1273E-201ENST00000581165 102 ntBASIC5.18□□□□□ -1.58
P04436 FAM72A-208ENST00000607379 1139 ntBASIC5.18□□□□□ -1.58
P04436 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.18□□□□□ -1.58
P04436 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
P04436 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
P04436 AC018628.1-201ENST00000624147 3819 ntBASIC5.18□□□□□ -1.58
P04436 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.18□□□□□ -1.58
P04436 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
P04436 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
P04436 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
P04436 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
P04436 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
P04436 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
P04436 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
P04436 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.17□□□□□ -1.58
P04436 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
P04436 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
P04436 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
P04436 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.17□□□□□ -1.58
P04436 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
P04436 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
P04436 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
P04436 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
P04436 RN7SKP124-201ENST00000364730 341 ntBASIC5.17□□□□□ -1.58
P04436 RNA5SP91-201ENST00000390902 119 ntBASIC5.17□□□□□ -1.58
P04436 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.17□□□□□ -1.58
P04436 NENFP1-201ENST00000419476 466 ntBASIC5.17□□□□□ -1.58
P04436 RNGTTP1-201ENST00000420965 728 ntBASIC5.17□□□□□ -1.58
P04436 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.17□□□□□ -1.58
P04436 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.17□□□□□ -1.58
P04436 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.17□□□□□ -1.58
P04436 LDHAP2-201ENST00000437325 985 ntBASIC5.17□□□□□ -1.58
P04436 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.17□□□□□ -1.58
P04436 AC104849.1-201ENST00000462623 405 ntBASIC5.17□□□□□ -1.58
P04436 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.17□□□□□ -1.58
P04436 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.17□□□□□ -1.58
P04436 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.17□□□□□ -1.58
P04436 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
P04436 ADAM3B-201ENST00000569937 840 ntBASIC5.17□□□□□ -1.58
P04436 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.17□□□□□ -1.58
P04436 AP000894.4-201ENST00000610185 483 ntBASIC5.17□□□□□ -1.58
P04436 AC109309.2-201ENST00000612597 332 ntBASIC5.17□□□□□ -1.58
P04436 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
P04436 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
P04436 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
P04436 AC005225.5-201ENST00000623547 2225 ntBASIC5.17□□□□□ -1.58
P04436 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.17□□□□□ -1.58
P04436 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
P04436 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
P04436 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
P04436 CASC19-248ENST00000641674 1356 ntBASIC5.16□□□□□ -1.58
P04436 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
P04436 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.16□□□□□ -1.58
P04436 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.16□□□□□ -1.58
P04436 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
P04436 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
P04436 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.16□□□□□ -1.58
P04436 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.16□□□□□ -1.58
P04436 RNA5SP319-201ENST00000362768 119 ntBASIC5.16□□□□□ -1.58
P04436 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.16□□□□□ -1.58
P04436 MIR551A-201ENST00000385042 96 ntBASIC5.16□□□□□ -1.58
P04436 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.16□□□□□ -1.58
P04436 RN7SKP229-201ENST00000410465 302 ntBASIC5.16□□□□□ -1.58
P04436 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.16□□□□□ -1.58
P04436 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.16□□□□□ -1.58
P04436 TMEM183AP1-205ENST00000432739 290 ntBASIC5.16□□□□□ -1.58
P04436 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.16□□□□□ -1.58
P04436 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.16□□□□□ -1.58
P04436 AL451063.1-201ENST00000450164 1133 ntBASIC5.16□□□□□ -1.58
P04436 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.16□□□□□ -1.58
P04436 AP000547.1-201ENST00000454360 617 ntBASIC5.16□□□□□ -1.58
P04436 RN7SL51P-201ENST00000468230 285 ntBASIC5.16□□□□□ -1.58
P04436 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 RPS7P6-201ENST00000485777 579 ntBASIC5.16□□□□□ -1.58
P04436 EIF3LP3-201ENST00000495197 822 ntBASIC5.16□□□□□ -1.58
P04436 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.16□□□□□ -1.58
P04436 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 RN7SKP99-201ENST00000517028 307 ntBASIC5.16□□□□□ -1.58
P04436 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.16□□□□□ -1.58
P04436 KCTD9P6-201ENST00000522306 950 ntBASIC5.16□□□□□ -1.58
P04436 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
P04436 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.16□□□□□ -1.58
P04436 OR4A6P-201ENST00000534364 970 ntBASIC5.16□□□□□ -1.58
P04436 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.16□□□□□ -1.58
P04436 AC015720.2-201ENST00000567709 334 ntBASIC5.16□□□□□ -1.58
P04436 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.16□□□□□ -1.58
P04436 MIR4311-201ENST00000580794 100 ntBASIC5.16□□□□□ -1.58
P04436 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.16□□□□□ -1.58
P04436 HIRAP1-201ENST00000605318 787 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms