Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.04□□□□□ -1.28
PDGFAP04085 AL389915.1-201ENST00000422463 466 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 AL512649.1-201ENST00000428997 581 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC7.04□□□□□ -1.28
PDGFAP04085 AC245452.2-201ENST00000435222 392 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC7.04□□□□□ -1.28
PDGFAP04085 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC7.04□□□□□ -1.28
PDGFAP04085 AL161454.1-201ENST00000446226 569 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 PDSS1P2-201ENST00000449397 678 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 RPL7P31-201ENST00000450192 724 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 MTND3P10-201ENST00000450967 341 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.04□□□□□ -1.28
PDGFAP04085 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC7.04□□□□□ -1.28
PDGFAP04085 SNRPFP4-201ENST00000456366 242 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 AC007547.2-201ENST00000468802 360 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 MTND6P6-201ENST00000478031 263 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 RN7SL259P-201ENST00000478499 253 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 AL079303.1-201ENST00000486611 463 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC7.04□□□□□ -1.28
PDGFAP04085 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.04□□□□□ -1.28
PDGFAP04085 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC7.04□□□□□ -1.28
PDGFAP04085 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.04□□□□□ -1.28
PDGFAP04085 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.04□□□□□ -1.28
PDGFAP04085 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
PDGFAP04085 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC7.04□□□□□ -1.28
PDGFAP04085 OR7E96P-201ENST00000530816 976 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.04□□□□□ -1.28
PDGFAP04085 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.04□□□□□ -1.28
PDGFAP04085 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC7.04□□□□□ -1.28
PDGFAP04085 AC137768.1-201ENST00000549998 553 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.04□□□□□ -1.28
PDGFAP04085 AC124947.2-202ENST00000552735 133 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 DPPA3P2-201ENST00000553589 478 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC7.04□□□□□ -1.28
PDGFAP04085 AC006960.3-201ENST00000561845 705 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 AP001004.1-201ENST00000582468 324 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.04□□□□□ -1.28
PDGFAP04085 AC010327.2-201ENST00000587647 488 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC7.04□□□□□ -1.28
PDGFAP04085 AC005084.1-201ENST00000605160 304 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 AL136139.1-201ENST00000605568 222 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 AC090525.3-201ENST00000605601 189 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDGFAP04085 AL161931.1-201ENST00000612768 246 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDGFAP04085 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDGFAP04085 AC092650.2-201ENST00000619984 902 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
PDGFAP04085 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.04□□□□□ -1.28
PDGFAP04085 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.04□□□□□ -1.28
PDGFAP04085 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDGFAP04085 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
PDGFAP04085 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDGFAP04085 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDGFAP04085 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.04□□□□□ -1.28
PDGFAP04085 AL354854.1-201ENST00000455940 1363 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 AL669831.5-218ENST00000591702 1873 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.04□□□□□ -1.28
PDGFAP04085 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDGFAP04085 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
PDGFAP04085 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
PDGFAP04085 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
PDGFAP04085 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.04□□□□□ -1.28
PDGFAP04085 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 AC107982.1-201ENST00000507171 1300 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.03□□□□□ -1.28
PDGFAP04085 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 AC125232.1-201ENST00000452554 1408 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
PDGFAP04085 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 NCOA4P3-201ENST00000513203 1877 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.03□□□□□ -1.28
PDGFAP04085 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PDGFAP04085 RNA5SP260-201ENST00000363849 111 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 SNORA62.2-201ENST00000364672 152 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 SNORA70I-201ENST00000384544 135 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 EI24P3-201ENST00000399046 1062 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 USP9YP6-201ENST00000413550 854 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.03□□□□□ -1.28
PDGFAP04085 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 AL109913.1-201ENST00000421173 514 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 AC009237.2-201ENST00000421358 284 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC7.03□□□□□ -1.28
PDGFAP04085 AC104843.2-201ENST00000427666 297 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 RNF11P2-201ENST00000427702 440 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.03□□□□□ -1.28
PDGFAP04085 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.03□□□□□ -1.28
PDGFAP04085 AL831737.1-201ENST00000441288 271 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC7.03□□□□□ -1.28
PDGFAP04085 RPL7P36-201ENST00000444633 681 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.03□□□□□ -1.28
PDGFAP04085 USP9YP34-201ENST00000453983 808 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms