Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AP002505.2-201ENST00000623585 696 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.46□□□□□ -1.37
COL2A1P02458 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL2A1P02458 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.46□□□□□ -1.37
COL2A1P02458 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL2A1P02458 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
COL2A1P02458 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL2A1P02458 ZNF733P-202ENST00000444809 1573 ntBASIC6.46□□□□□ -1.38
COL2A1P02458 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL2A1P02458 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL2A1P02458 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.46□□□□□ -1.38
COL2A1P02458 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.46□□□□□ -1.38
COL2A1P02458 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
COL2A1P02458 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL2A1P02458 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
COL2A1P02458 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL2A1P02458 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL2A1P02458 MIR765-201ENST00000390226 114 ntBASIC6.46□□□□□ -1.38
COL2A1P02458 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL2A1P02458 DBIP1-201ENST00000401435 260 ntBASIC6.46□□□□□ -1.38
COL2A1P02458 DUTP5-201ENST00000406790 469 ntBASIC6.46□□□□□ -1.38
COL2A1P02458 AC096921.1-201ENST00000411661 375 ntBASIC6.46□□□□□ -1.38
COL2A1P02458 RPSAP35-201ENST00000413753 818 ntBASIC6.46□□□□□ -1.38
COL2A1P02458 RPS26P13-201ENST00000419030 330 ntBASIC6.46□□□□□ -1.38
COL2A1P02458 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.46□□□□□ -1.38
COL2A1P02458 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.46□□□□□ -1.38
COL2A1P02458 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL2A1P02458 OR1F2P-201ENST00000570470 933 ntBASIC6.46□□□□□ -1.38
COL2A1P02458 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC6.46□□□□□ -1.38
COL2A1P02458 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.46□□□□□ -1.38
COL2A1P02458 AC133644.2-201ENST00000608142 540 ntBASIC6.46□□□□□ -1.38
COL2A1P02458 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.46□□□□□ -1.38
COL2A1P02458 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL2A1P02458 AC112255.1-201ENST00000624070 2493 ntBASIC6.46□□□□□ -1.38
COL2A1P02458 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.46□□□□□ -1.38
COL2A1P02458 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
COL2A1P02458 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.46□□□□□ -1.38
COL2A1P02458 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.46□□□□□ -1.38
COL2A1P02458 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL2A1P02458 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL2A1P02458 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
COL2A1P02458 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
COL2A1P02458 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL2A1P02458 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
COL2A1P02458 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL2A1P02458 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.45□□□□□ -1.38
COL2A1P02458 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
COL2A1P02458 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL2A1P02458 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.45□□□□□ -1.38
COL2A1P02458 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
COL2A1P02458 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.45□□□□□ -1.38
COL2A1P02458 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL2A1P02458 AL133388.1-201ENST00000404509 287 ntBASIC6.45□□□□□ -1.38
COL2A1P02458 AL356967.1-201ENST00000406305 431 ntBASIC6.45□□□□□ -1.38
COL2A1P02458 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.45□□□□□ -1.38
COL2A1P02458 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
COL2A1P02458 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.45□□□□□ -1.38
COL2A1P02458 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.45□□□□□ -1.38
COL2A1P02458 GYG1P1-201ENST00000460864 698 ntBASIC6.45□□□□□ -1.38
COL2A1P02458 AC007686.1-201ENST00000488511 463 ntBASIC6.45□□□□□ -1.38
COL2A1P02458 RN7SL346P-201ENST00000491561 294 ntBASIC6.45□□□□□ -1.38
COL2A1P02458 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.45□□□□□ -1.38
COL2A1P02458 SCARNA16.4-201ENST00000516956 187 ntBASIC6.45□□□□□ -1.38
COL2A1P02458 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.45□□□□□ -1.38
COL2A1P02458 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.45□□□□□ -1.38
COL2A1P02458 AC122688.1-201ENST00000541494 223 ntBASIC6.45□□□□□ -1.38
COL2A1P02458 MIR4330-201ENST00000579077 105 ntBASIC6.45□□□□□ -1.38
COL2A1P02458 AC060766.1-201ENST00000590824 627 ntBASIC6.45□□□□□ -1.38
COL2A1P02458 AF230666.2-201ENST00000602328 725 ntBASIC6.45□□□□□ -1.38
COL2A1P02458 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.45□□□□□ -1.38
COL2A1P02458 LINC01739-205ENST00000641890 573 ntBASIC6.45□□□□□ -1.38
COL2A1P02458 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
COL2A1P02458 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
COL2A1P02458 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL2A1P02458 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL2A1P02458 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL2A1P02458 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL2A1P02458 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL2A1P02458 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL2A1P02458 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.44□□□□□ -1.38
COL2A1P02458 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.44□□□□□ -1.38
COL2A1P02458 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL2A1P02458 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.44□□□□□ -1.38
COL2A1P02458 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.44□□□□□ -1.38
COL2A1P02458 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.44□□□□□ -1.38
COL2A1P02458 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL2A1P02458 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL2A1P02458 AC140479.2-201ENST00000421567 3130 ntBASIC6.44□□□□□ -1.38
COL2A1P02458 GNG5P2-201ENST00000372054 207 ntBASIC6.44□□□□□ -1.38
COL2A1P02458 U3.36-201ENST00000408418 213 ntBASIC6.44□□□□□ -1.38
COL2A1P02458 AC093655.2-201ENST00000425735 631 ntBASIC6.44□□□□□ -1.38
COL2A1P02458 GSTM5P1-201ENST00000434751 660 ntBASIC6.44□□□□□ -1.38
COL2A1P02458 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC6.44□□□□□ -1.38
COL2A1P02458 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.44□□□□□ -1.38
COL2A1P02458 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL2A1P02458 SNRPCP2-201ENST00000504370 475 ntBASIC6.44□□□□□ -1.38
COL2A1P02458 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.44□□□□□ -1.38
COL2A1P02458 AC021106.1-201ENST00000509020 1058 ntBASIC6.44□□□□□ -1.38
COL2A1P02458 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.44□□□□□ -1.38
COL2A1P02458 AC024940.3-201ENST00000538551 316 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms