Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.62□□□□□ -1.35
COL1A1P02452 PSMD10P3-201ENST00000437000 448 ntBASIC6.62□□□□□ -1.35
COL1A1P02452 ELOCP3-201ENST00000439303 348 ntBASIC6.62□□□□□ -1.35
COL1A1P02452 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.62□□□□□ -1.35
COL1A1P02452 AC021106.1-201ENST00000509020 1058 ntBASIC6.62□□□□□ -1.35
COL1A1P02452 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.62□□□□□ -1.35
COL1A1P02452 AP001922.4-201ENST00000526967 290 ntBASIC6.62□□□□□ -1.35
COL1A1P02452 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
COL1A1P02452 HNRNPCP1-201ENST00000556181 766 ntBASIC6.62□□□□□ -1.35
COL1A1P02452 AC018558.5-201ENST00000565840 952 ntBASIC6.62□□□□□ -1.35
COL1A1P02452 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.62□□□□□ -1.35
COL1A1P02452 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
COL1A1P02452 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
COL1A1P02452 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL1A1P02452 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL1A1P02452 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COL1A1P02452 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
COL1A1P02452 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL1A1P02452 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL1A1P02452 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
COL1A1P02452 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL1A1P02452 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL1A1P02452 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL1A1P02452 AL117339.4-201ENST00000608335 7063 ntBASIC6.62□□□□□ -1.35
COL1A1P02452 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL1A1P02452 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL1A1P02452 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
COL1A1P02452 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL1A1P02452 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL1A1P02452 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL1A1P02452 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
COL1A1P02452 AL009179.1-201ENST00000406085 265 ntBASIC6.61□□□□□ -1.35
COL1A1P02452 AL139128.1-201ENST00000413921 941 ntBASIC6.61□□□□□ -1.35
COL1A1P02452 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.61□□□□□ -1.35
COL1A1P02452 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.61□□□□□ -1.35
COL1A1P02452 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.61□□□□□ -1.35
COL1A1P02452 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.61□□□□□ -1.35
COL1A1P02452 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.61□□□□□ -1.35
COL1A1P02452 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.61□□□□□ -1.35
COL1A1P02452 AZGP1P2-201ENST00000454506 345 ntBASIC6.61□□□□□ -1.35
COL1A1P02452 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.61□□□□□ -1.35
COL1A1P02452 SNRPCP2-201ENST00000504370 475 ntBASIC6.61□□□□□ -1.35
COL1A1P02452 AC110775.1-201ENST00000513721 462 ntBASIC6.61□□□□□ -1.35
COL1A1P02452 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.61□□□□□ -1.35
COL1A1P02452 RN7SKP67-201ENST00000515905 235 ntBASIC6.61□□□□□ -1.35
COL1A1P02452 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL1A1P02452 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.61□□□□□ -1.35
COL1A1P02452 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.61□□□□□ -1.35
COL1A1P02452 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.61□□□□□ -1.35
COL1A1P02452 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.61□□□□□ -1.35
COL1A1P02452 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
COL1A1P02452 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.61□□□□□ -1.35
COL1A1P02452 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.61□□□□□ -1.35
COL1A1P02452 AC006116.3-201ENST00000592968 361 ntBASIC6.61□□□□□ -1.35
COL1A1P02452 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.61□□□□□ -1.35
COL1A1P02452 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.61□□□□□ -1.35
COL1A1P02452 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.61□□□□□ -1.35
COL1A1P02452 AP002799.1-201ENST00000623552 423 ntBASIC6.61□□□□□ -1.35
COL1A1P02452 AC119674.1-217ENST00000641942 1086 ntBASIC6.61□□□□□ -1.35
COL1A1P02452 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL1A1P02452 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL1A1P02452 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL1A1P02452 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.61□□□□□ -1.35
COL1A1P02452 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.61□□□□□ -1.35
COL1A1P02452 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL1A1P02452 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL1A1P02452 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL1A1P02452 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.61□□□□□ -1.35
COL1A1P02452 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL1A1P02452 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL1A1P02452 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL1A1P02452 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
COL1A1P02452 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL1A1P02452 U3.36-201ENST00000408418 213 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 GSTM5P1-201ENST00000434751 660 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 ATP5LP5-201ENST00000483050 299 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.6□□□□□ -1.35
COL1A1P02452 MTND6P2-201ENST00000512226 524 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 OR8G3P-201ENST00000533406 921 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 AP004607.2-201ENST00000533949 322 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 OR11H3P-201ENST00000554547 982 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.6□□□□□ -1.35
COL1A1P02452 AC060780.2-201ENST00000589047 198 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 AC069307.1-201ENST00000602820 447 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 AC104785.1-201ENST00000603220 588 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 AC133644.2-201ENST00000608142 540 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.6□□□□□ -1.35
COL1A1P02452 AC135068.5-201ENST00000624197 983 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
COL1A1P02452 LINC01739-205ENST00000641890 573 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL1A1P02452 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
COL1A1P02452 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL1A1P02452 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL1A1P02452 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
COL1A1P02452 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.6□□□□□ -1.35
COL1A1P02452 OR55B1P-203ENST00000641518 2602 ntBASIC6.6□□□□□ -1.35
COL1A1P02452 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
COL1A1P02452 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.6□□□□□ -1.35
COL1A1P02452 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms