Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFP01375 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFP01375 AL161912.4-201ENST00000623889 2468 ntBASIC5.45□□□□□ -1.54
TNFP01375 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TNFP01375 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TNFP01375 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.44□□□□□ -1.54
TNFP01375 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TNFP01375 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TNFP01375 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TNFP01375 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TNFP01375 MIR105-2-201ENST00000385083 81 ntBASIC5.44□□□□□ -1.54
TNFP01375 MIR223-201ENST00000385204 110 ntBASIC5.44□□□□□ -1.54
TNFP01375 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TNFP01375 AL121977.1-201ENST00000401636 979 ntBASIC5.44□□□□□ -1.54
TNFP01375 RNU4-34P-201ENST00000410431 124 ntBASIC5.44□□□□□ -1.54
TNFP01375 RPL35AP24-201ENST00000413846 330 ntBASIC5.44□□□□□ -1.54
TNFP01375 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFP01375 SLC35E1P1-201ENST00000419313 864 ntBASIC5.44□□□□□ -1.54
TNFP01375 AL133325.1-201ENST00000421090 382 ntBASIC5.44□□□□□ -1.54
TNFP01375 AC092106.1-201ENST00000444291 373 ntBASIC5.44□□□□□ -1.54
TNFP01375 AC105399.1-202ENST00000447303 205 ntBASIC5.44□□□□□ -1.54
TNFP01375 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFP01375 PDCL3P4-201ENST00000489621 720 ntBASIC5.44□□□□□ -1.54
TNFP01375 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
TNFP01375 RN7SL447P-201ENST00000494711 245 ntBASIC5.44□□□□□ -1.54
TNFP01375 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.44□□□□□ -1.54
TNFP01375 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFP01375 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TNFP01375 OR10G5P-201ENST00000532733 358 ntBASIC5.44□□□□□ -1.54
TNFP01375 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TNFP01375 AC137627.1-201ENST00000545761 289 ntBASIC5.44□□□□□ -1.54
TNFP01375 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFP01375 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFP01375 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.44□□□□□ -1.54
TNFP01375 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.44□□□□□ -1.54
TNFP01375 PCA3_2.1-201ENST00000612507 409 ntBASIC5.44□□□□□ -1.54
TNFP01375 WBP1LP8-201ENST00000617401 327 ntBASIC5.44□□□□□ -1.54
TNFP01375 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TNFP01375 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
TNFP01375 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TNFP01375 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TNFP01375 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.44□□□□□ -1.54
TNFP01375 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TNFP01375 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TNFP01375 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.44□□□□□ -1.54
TNFP01375 AL590763.1-201ENST00000398297 1545 ntBASIC5.43□□□□□ -1.54
TNFP01375 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TNFP01375 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TNFP01375 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TNFP01375 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TNFP01375 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TNFP01375 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TNFP01375 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TNFP01375 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TNFP01375 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TNFP01375 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TNFP01375 AL158152.1-201ENST00000602652 1435 ntBASIC5.43□□□□□ -1.54
TNFP01375 RNU6-171P-201ENST00000384354 107 ntBASIC5.43□□□□□ -1.54
TNFP01375 AC005042.1-201ENST00000393397 800 ntBASIC5.43□□□□□ -1.54
TNFP01375 RPL23AP18-201ENST00000416139 468 ntBASIC5.43□□□□□ -1.54
TNFP01375 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.43□□□□□ -1.54
TNFP01375 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.43□□□□□ -1.54
TNFP01375 MRPS21P3-201ENST00000436696 262 ntBASIC5.43□□□□□ -1.54
TNFP01375 RN7SL799P-201ENST00000475891 298 ntBASIC5.43□□□□□ -1.54
TNFP01375 RPS4XP1-201ENST00000482189 787 ntBASIC5.43□□□□□ -1.54
TNFP01375 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TNFP01375 AC024558.1-201ENST00000505008 528 ntBASIC5.43□□□□□ -1.54
TNFP01375 SCARNA16.4-201ENST00000516956 187 ntBASIC5.43□□□□□ -1.54
TNFP01375 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.43□□□□□ -1.54
TNFP01375 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.43□□□□□ -1.54
TNFP01375 AC211433.2-201ENST00000608433 387 ntBASIC5.43□□□□□ -1.54
TNFP01375 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.43□□□□□ -1.54
TNFP01375 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.43□□□□□ -1.54
TNFP01375 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.43□□□□□ -1.54
TNFP01375 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.43□□□□□ -1.54
TNFP01375 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.43□□□□□ -1.54
TNFP01375 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TNFP01375 PABPC1P6-201ENST00000445594 1829 ntBASIC5.43□□□□□ -1.54
TNFP01375 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TNFP01375 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TNFP01375 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.43□□□□□ -1.54
TNFP01375 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TNFP01375 AC235565.1-201ENST00000456962 1325 ntBASIC5.43□□□□□ -1.54
TNFP01375 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TNFP01375 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.43□□□□□ -1.54
TNFP01375 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
TNFP01375 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TNFP01375 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
TNFP01375 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
TNFP01375 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
TNFP01375 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TNFP01375 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TNFP01375 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TNFP01375 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TNFP01375 AL121886.1-201ENST00000358609 435 ntBASIC5.42□□□□□ -1.54
TNFP01375 RNU1-19P-201ENST00000363306 165 ntBASIC5.42□□□□□ -1.54
TNFP01375 RN7SKP279-201ENST00000411383 298 ntBASIC5.42□□□□□ -1.54
TNFP01375 RPS26P38-201ENST00000414476 348 ntBASIC5.42□□□□□ -1.54
TNFP01375 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.42□□□□□ -1.54
TNFP01375 RN7SL172P-201ENST00000460535 303 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms