Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PDGFBP01127 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PDGFBP01127 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PDGFBP01127 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
PDGFBP01127 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PDGFBP01127 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.84□□□□□ -1.48
PDGFBP01127 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PDGFBP01127 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.48
PDGFBP01127 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PDGFBP01127 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PDGFBP01127 CUL4AP1-201ENST00000514750 1863 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 IMMTP1-201ENST00000435590 2219 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 AC008957.3-201ENST00000624112 2242 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.83□□□□□ -1.48
PDGFBP01127 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 PABPC1P8-201ENST00000452851 2086 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PDGFBP01127 AL589994.1-201ENST00000404962 340 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 AL356967.1-201ENST00000406305 431 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 GAPDHP42-201ENST00000406848 981 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 AL356968.2-201ENST00000412769 1257 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 RPL23AP60-201ENST00000450011 454 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 RN7SL738P-201ENST00000470264 297 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.83□□□□□ -1.48
PDGFBP01127 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.83□□□□□ -1.48
PDGFBP01127 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.83□□□□□ -1.48
PDGFBP01127 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.83□□□□□ -1.48
PDGFBP01127 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.83□□□□□ -1.48
PDGFBP01127 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.83□□□□□ -1.48
PDGFBP01127 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.83□□□□□ -1.48
PDGFBP01127 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.83□□□□□ -1.48
PDGFBP01127 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.83□□□□□ -1.48
PDGFBP01127 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.83□□□□□ -1.48
PDGFBP01127 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.83□□□□□ -1.48
PDGFBP01127 AC087283.1-201ENST00000604029 1074 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 CYCSP1-201ENST00000604815 315 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 PPATP2-201ENST00000605635 508 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 AC000068.2-201ENST00000608816 460 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 AC009163.6-201ENST00000612367 342 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.83□□□□□ -1.48
PDGFBP01127 AC022726.2-201ENST00000634673 547 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 AC003992.1-201ENST00000635364 557 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PDGFBP01127 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PDGFBP01127 AC087516.1-201ENST00000561236 2428 ntBASIC5.83□□□□□ -1.48
PDGFBP01127 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDGFBP01127 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PDGFBP01127 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFBP01127 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.82□□□□□ -1.48
PDGFBP01127 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFBP01127 AC096921.2-201ENST00000561507 1916 ntBASIC5.82□□□□□ -1.48
PDGFBP01127 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.82□□□□□ -1.48
PDGFBP01127 AC026951.1-201ENST00000559530 2459 ntBASIC5.82□□□□□ -1.48
PDGFBP01127 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFBP01127 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PDGFBP01127 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.82□□□□□ -1.48
PDGFBP01127 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFBP01127 RNA5SP211-201ENST00000365516 117 ntBASIC5.82□□□□□ -1.48
PDGFBP01127 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFBP01127 AC093162.1-201ENST00000419682 124 ntBASIC5.82□□□□□ -1.48
PDGFBP01127 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.82□□□□□ -1.48
PDGFBP01127 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PDGFBP01127 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.82□□□□□ -1.48
PDGFBP01127 VDAC2P4-201ENST00000452925 711 ntBASIC5.82□□□□□ -1.48
PDGFBP01127 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.82□□□□□ -1.48
PDGFBP01127 PRELID3BP5-201ENST00000508612 460 ntBASIC5.82□□□□□ -1.48
PDGFBP01127 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
PDGFBP01127 OR6M2P-201ENST00000529831 871 ntBASIC5.82□□□□□ -1.48
PDGFBP01127 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.82□□□□□ -1.48
PDGFBP01127 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.82□□□□□ -1.48
PDGFBP01127 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.82□□□□□ -1.48
PDGFBP01127 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.82□□□□□ -1.48
PDGFBP01127 AL445647.2-201ENST00000615170 130 ntBASIC5.82□□□□□ -1.48
PDGFBP01127 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.82□□□□□ -1.48
PDGFBP01127 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFBP01127 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
PDGFBP01127 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFBP01127 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFBP01127 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFBP01127 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
PDGFBP01127 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.82□□□□□ -1.48
PDGFBP01127 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.82□□□□□ -1.48
PDGFBP01127 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFBP01127 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFBP01127 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFBP01127 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms