Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SLC28A1O00337 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SLC28A1O00337 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC28A1O00337 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SLC28A1O00337 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC28A1O00337 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC28A1O00337 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SLC28A1O00337 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC28A1O00337 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC28A1O00337 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
SLC28A1O00337 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.45□□□□□ -1.54
SLC28A1O00337 AC125336.1-201ENST00000508893 2827 ntBASIC5.45□□□□□ -1.54
SLC28A1O00337 AL138820.1-201ENST00000617901 5305 ntBASIC5.45□□□□□ -1.54
SLC28A1O00337 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC28A1O00337 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC28A1O00337 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC28A1O00337 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
SLC28A1O00337 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC28A1O00337 AC004158.1-201ENST00000564508 4319 ntBASIC5.45□□□□□ -1.54
SLC28A1O00337 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC28A1O00337 AC112255.1-201ENST00000624070 2493 ntBASIC5.45□□□□□ -1.54
SLC28A1O00337 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC28A1O00337 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC28A1O00337 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SLC28A1O00337 SNORA70.6-201ENST00000383934 134 ntBASIC5.45□□□□□ -1.54
SLC28A1O00337 U3.28-201ENST00000391249 210 ntBASIC5.45□□□□□ -1.54
SLC28A1O00337 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC28A1O00337 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC28A1O00337 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC28A1O00337 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC28A1O00337 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC28A1O00337 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC28A1O00337 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC28A1O00337 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC28A1O00337 RN7SL188P-201ENST00000469842 285 ntBASIC5.45□□□□□ -1.54
SLC28A1O00337 AC147055.1-201ENST00000509261 750 ntBASIC5.45□□□□□ -1.54
SLC28A1O00337 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC28A1O00337 SCARNA6.1-201ENST00000516989 238 ntBASIC5.45□□□□□ -1.54
SLC28A1O00337 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC28A1O00337 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC28A1O00337 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC28A1O00337 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC28A1O00337 AC084121.1-201ENST00000533882 835 ntBASIC5.45□□□□□ -1.54
SLC28A1O00337 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC28A1O00337 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC28A1O00337 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.45□□□□□ -1.54
SLC28A1O00337 AC002310.3-201ENST00000569728 723 ntBASIC5.45□□□□□ -1.54
SLC28A1O00337 AC138207.8-204ENST00000579588 527 ntBASIC5.45□□□□□ -1.54
SLC28A1O00337 MIR4433B-201ENST00000581329 102 ntBASIC5.45□□□□□ -1.54
SLC28A1O00337 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.45□□□□□ -1.54
SLC28A1O00337 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC28A1O00337 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC28A1O00337 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC28A1O00337 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC28A1O00337 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SLC28A1O00337 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC28A1O00337 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SLC28A1O00337 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SLC28A1O00337 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC28A1O00337 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC28A1O00337 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC28A1O00337 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC28A1O00337 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC28A1O00337 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC28A1O00337 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC28A1O00337 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC28A1O00337 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC28A1O00337 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC28A1O00337 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC28A1O00337 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SLC28A1O00337 OR56A4-201ENST00000330728 1209 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC28A1O00337 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC28A1O00337 AL159987.1-201ENST00000347911 293 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 RNA5SP500-201ENST00000364486 119 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.44□□□□□ -1.54
SLC28A1O00337 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC28A1O00337 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC28A1O00337 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC28A1O00337 AK4P4-201ENST00000419465 646 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 VTI1BP4-201ENST00000427516 527 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC28A1O00337 EEF1B2P3-201ENST00000447718 678 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 RPS17P15-201ENST00000475609 349 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC28A1O00337 RPL32P33-201ENST00000487023 394 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 NPM1P28-201ENST00000492269 840 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 LSM3P4-201ENST00000502948 309 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC28A1O00337 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC28A1O00337 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC28A1O00337 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC28A1O00337 RN7SKP253-201ENST00000516424 309 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC28A1O00337 IGLV3-30-201ENST00000524362 298 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC28A1O00337 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC28A1O00337 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC28A1O00337 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC28A1O00337 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 252.5 ms