Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AC105384.2-201ENST00000508433 640 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AC073648.1-201ENST00000508957 930 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 EIF3KP3-201ENST00000514461 639 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 RN7SKP52-201ENST00000516219 250 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 CDC42P3-201ENST00000518493 633 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 IGHV4-55-201ENST00000520889 368 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 SLC25A51P2-201ENST00000535708 889 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AL132640.1-201ENST00000559594 619 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AC092718.4-201ENST00000566639 716 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 SYPL1P2-201ENST00000582878 727 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AC211469.1-201ENST00000604263 394 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 SNORD96A-201ENST00000606577 79 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AC113361.1-201ENST00000606683 543 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 TTR-204ENST00000610404 1040 ntTSL 5 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 FAM74A6-203ENST00000615956 481 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 FLII-230ENST00000628188 156 ntTSL 5 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC2.96□□□□□ -1.94
CHKB-CPT1BH3BT56 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC093311.1-201ENST00000506586 2021 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 MAPK10-304ENST00000641341 3984 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 RNU1-49P-201ENST00000363468 159 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AL033519.1-201ENST00000407266 307 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AL139039.2-201ENST00000407436 479 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 RNF10P1-201ENST00000418589 369 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC004552.1-201ENST00000419089 348 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 PUDPP2-201ENST00000431423 643 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 MED28P4-201ENST00000433137 572 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 RPL22P11-201ENST00000434894 385 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 SNRPFP2-201ENST00000440710 251 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC027124.1-201ENST00000440852 466 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC023141.8-201ENST00000442554 208 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC002553.1-201ENST00000442828 802 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AL596266.1-201ENST00000448132 400 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 RPS23P2-201ENST00000463671 415 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 RN7SL508P-201ENST00000464472 303 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC104339.1-201ENST00000465478 348 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 RPS26P3-201ENST00000470205 348 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 RN7SL369P-201ENST00000477138 299 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC090543.2-201ENST00000483963 348 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 RPS7P6-201ENST00000485777 579 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC004057.1-201ENST00000485827 348 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 CASC11-203ENST00000519071 791 ntTSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 OR5M4P-201ENST00000529436 925 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 NDUFA3P2-201ENST00000531434 232 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC084121.1-201ENST00000533882 835 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC122688.1-201ENST00000541494 223 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC007068.2-201ENST00000543168 395 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC137627.1-201ENST00000545761 289 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms