Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC096661.1-201ENST00000515870 822 ntBASIC6.24□□□□□ -1.41
SHISA3A0PJX4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 SRMP2-201ENST00000553832 916 ntBASIC6.24□□□□□ -1.41
SHISA3A0PJX4 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 RN7SL664P-201ENST00000584239 305 ntBASIC6.24□□□□□ -1.41
SHISA3A0PJX4 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 YTHDF2P1-201ENST00000604759 1271 ntBASIC6.24□□□□□ -1.41
SHISA3A0PJX4 AC079395.2-201ENST00000610982 737 ntBASIC6.24□□□□□ -1.41
SHISA3A0PJX4 AC091304.9-201ENST00000612091 226 ntBASIC6.24□□□□□ -1.41
SHISA3A0PJX4 MIR6762-201ENST00000613340 86 ntBASIC6.24□□□□□ -1.41
SHISA3A0PJX4 AL445670.1-201ENST00000618889 801 ntBASIC6.24□□□□□ -1.41
SHISA3A0PJX4 AC016717.3-201ENST00000624730 554 ntBASIC6.24□□□□□ -1.41
SHISA3A0PJX4 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 AC099654.10-201ENST00000640395 161 ntBASIC6.24□□□□□ -1.41
SHISA3A0PJX4 MIR193BHG-210ENST00000641327 515 ntBASIC6.24□□□□□ -1.41
SHISA3A0PJX4 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 SAMMSON-203ENST00000641005 2168 ntBASIC6.24□□□□□ -1.41
SHISA3A0PJX4 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.24□□□□□ -1.41
SHISA3A0PJX4 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHISA3A0PJX4 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AC083806.2-201ENST00000617795 2685 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 Z99496.1-201ENST00000469424 1477 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AL357556.1-201ENST00000421884 1388 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 RNU1-47P-201ENST00000362966 163 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 RNA5SP263-201ENST00000363376 128 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 RNU6-1055P-201ENST00000391085 107 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 EEF1GP6-201ENST00000402309 905 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AL034372.1-201ENST00000407586 754 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 HMGN1P14-201ENST00000412459 517 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 NPM1P4-201ENST00000414095 812 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 GNAI2P2-201ENST00000417003 916 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 RPL21P32-201ENST00000419877 477 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 DUTP4-201ENST00000424782 475 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AL121916.1-201ENST00000429405 308 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AC000111.3-201ENST00000433478 193 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AC244505.2-201ENST00000435089 759 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 RPS25P9-201ENST00000435591 252 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 MTCO3P18-201ENST00000440206 761 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 OR13K1P-201ENST00000444577 975 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 PRDX1P1-201ENST00000449329 596 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 OR6C5P-201ENST00000452388 923 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AC007000.1-201ENST00000453064 794 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 NPM1P9-201ENST00000453156 844 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 PSPC1P2-201ENST00000455130 225 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AC026826.1-201ENST00000493002 361 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AP001646.1-201ENST00000527936 915 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms