Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RNU6-889P-201ENST00000517189 103 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC084824.2-201ENST00000548906 345 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 MIR744-201ENST00000578242 98 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AL133247.2-201ENST00000603236 482 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC135178.6-201ENST00000605314 398 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 OR51C1P-201ENST00000608504 942 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC018645.2-201ENST00000609151 472 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC005618.4-201ENST00000625053 554 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC110792.3-201ENST00000595906 1614 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 SAMM50P1-201ENST00000455403 1399 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 RNA5SP273-201ENST00000362484 113 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 RNU6-609P-201ENST00000365459 107 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 MIR421-201ENST00000365696 85 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 NIFKP3-201ENST00000417799 865 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 OR5W1P-201ENST00000423705 938 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 MTND4P24-201ENST00000424002 397 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 VN1R110P-201ENST00000438988 971 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 MED28P3-201ENST00000444288 531 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC023194.2-201ENST00000465398 406 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC018635.1-201ENST00000468292 1030 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC092902.1-201ENST00000486999 259 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 RN7SL57P-201ENST00000493687 290 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 RPS17P5-201ENST00000498293 408 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 RBBP4P1-201ENST00000502424 1276 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC119751.4-201ENST00000507498 357 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 PRMT5P1-201ENST00000514351 598 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AL356801.1-201ENST00000559320 294 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC106785.3-201ENST00000564064 847 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 BNIP3P31-201ENST00000604515 566 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 HMGB1P51-201ENST00000605166 638 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AL391834.1-201ENST00000609609 560 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC016957.2-201ENST00000616998 848 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms