Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTNNA3Q9UI47 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CTNNA3Q9UI47 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.83□□□□□ -1.32
CTNNA3Q9UI47 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTNNA3Q9UI47 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.83□□□□□ -1.32
CTNNA3Q9UI47 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CTNNA3Q9UI47 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.83□□□□□ -1.32
CTNNA3Q9UI47 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.83□□□□□ -1.32
CTNNA3Q9UI47 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CTNNA3Q9UI47 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
CTNNA3Q9UI47 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTNNA3Q9UI47 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 AC027279.1-201ENST00000568885 4284 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 RNU1-136P-201ENST00000384181 164 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 MIR130A-201ENST00000385274 89 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 MIR143-201ENST00000385300 106 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 GTF3AP1-201ENST00000416942 1004 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 BX276092.6-201ENST00000430476 250 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 HMGB3P24-201ENST00000433260 622 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 BX276092.8-201ENST00000455722 250 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 AC110749.1-201ENST00000462007 357 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 RPSAP37-201ENST00000470913 821 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 DUTP1-201ENST00000493631 470 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 AL136038.1-201ENST00000497246 351 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 TMEM97P2-201ENST00000517841 403 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 AC063977.5-201ENST00000601044 974 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 AL512624.1-201ENST00000613638 469 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 AP000550.3-201ENST00000637734 379 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 AL049767.1-202ENST00000637826 242 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 AC140479.2-201ENST00000421567 3130 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 UGT2B24P-201ENST00000514441 1597 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 AC091305.2-201ENST00000624049 1576 ntBASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.82□□□□□ -1.32
CTNNA3Q9UI47 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 AL121776.1-201ENST00000429337 372 ntBASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 HMGB1P42-201ENST00000532126 553 ntBASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 AGGF1P7-201ENST00000562369 913 ntBASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 AC125494.2-201ENST00000602431 657 ntBASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 FAM72A-208ENST00000607379 1139 ntBASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 AC087565.3-203ENST00000641018 837 ntBASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTNNA3Q9UI47 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 RNA5SP242-201ENST00000364171 118 ntBASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 PEX12P1-201ENST00000400284 1048 ntBASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 SDHDP6-201ENST00000414693 480 ntBASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 RNF10P1-201ENST00000418589 369 ntBASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 AC127526.2-201ENST00000426436 775 ntBASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms