Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 AL009179.1-201ENST00000406085 265 ntBASIC6.98□□□□□ -1.29
SCN11AQ9UI33 RNF10P1-201ENST00000418589 369 ntBASIC6.98□□□□□ -1.29
SCN11AQ9UI33 AL590762.4-201ENST00000425885 253 ntBASIC6.98□□□□□ -1.29
SCN11AQ9UI33 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 CEACAMP7-201ENST00000444105 496 ntBASIC6.98□□□□□ -1.29
SCN11AQ9UI33 AC109462.1-201ENST00000491087 368 ntBASIC6.98□□□□□ -1.29
SCN11AQ9UI33 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 AC005341.1-201ENST00000571086 708 ntBASIC6.98□□□□□ -1.29
SCN11AQ9UI33 MIR4646-201ENST00000580775 63 ntBASIC6.98□□□□□ -1.29
SCN11AQ9UI33 AC060766.1-201ENST00000590824 627 ntBASIC6.98□□□□□ -1.29
SCN11AQ9UI33 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 ZNF812P-201ENST00000457674 1694 ntBASIC6.98□□□□□ -1.29
SCN11AQ9UI33 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC6.98□□□□□ -1.29
SCN11AQ9UI33 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 RN7SKP95-201ENST00000362860 303 ntBASIC6.97□□□□□ -1.29
SCN11AQ9UI33 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.97□□□□□ -1.29
SCN11AQ9UI33 VDAC1P6-201ENST00000430062 855 ntBASIC6.97□□□□□ -1.29
SCN11AQ9UI33 LINC02210-201ENST00000444561 288 ntBASIC6.97□□□□□ -1.29
SCN11AQ9UI33 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 AC109464.1-201ENST00000511091 819 ntBASIC6.97□□□□□ -1.29
SCN11AQ9UI33 GSTP1P1-201ENST00000548078 319 ntBASIC6.97□□□□□ -1.29
SCN11AQ9UI33 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 AL158152.1-201ENST00000602652 1435 ntBASIC6.97□□□□□ -1.29
SCN11AQ9UI33 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 MFSD8-216ENST00000641147 4009 ntBASIC6.97□□□□□ -1.29
SCN11AQ9UI33 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 AL359715.3-201ENST00000569267 2123 ntBASIC6.97□□□□□ -1.29
SCN11AQ9UI33 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 RNU4-2-201ENST00000365668 141 ntBASIC6.97□□□□□ -1.29
SCN11AQ9UI33 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 DDX39BP1-205ENST00000422507 192 ntBASIC6.97□□□□□ -1.29
SCN11AQ9UI33 RPS23P9-201ENST00000448848 438 ntBASIC6.97□□□□□ -1.29
SCN11AQ9UI33 AC093890.1-201ENST00000502554 540 ntBASIC6.97□□□□□ -1.29
SCN11AQ9UI33 AC134349.2-201ENST00000535136 910 ntBASIC6.97□□□□□ -1.29
SCN11AQ9UI33 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 AC009237.13-201ENST00000603193 276 ntBASIC6.97□□□□□ -1.29
SCN11AQ9UI33 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
SCN11AQ9UI33 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.96□□□□□ -1.29
SCN11AQ9UI33 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
SCN11AQ9UI33 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.96□□□□□ -1.29
SCN11AQ9UI33 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.96□□□□□ -1.29
SCN11AQ9UI33 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.96□□□□□ -1.29
SCN11AQ9UI33 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SCN11AQ9UI33 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
SCN11AQ9UI33 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
SCN11AQ9UI33 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 RNA5SP305-201ENST00000362665 119 ntBASIC6.96□□□□□ -1.3
SCN11AQ9UI33 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 MIR141-201ENST00000384975 95 ntBASIC6.96□□□□□ -1.3
SCN11AQ9UI33 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.96□□□□□ -1.3
SCN11AQ9UI33 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.96□□□□□ -1.3
SCN11AQ9UI33 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 AP002373.2-201ENST00000541631 1060 ntBASIC6.96□□□□□ -1.3
SCN11AQ9UI33 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 AP003789.1-201ENST00000617737 605 ntBASIC6.96□□□□□ -1.3
SCN11AQ9UI33 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms