Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 RN7SKP17-201ENST00000411242 351 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC092106.1-201ENST00000444291 373 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC026348.1-201ENST00000462549 1053 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 COPS8P2-201ENST00000473228 627 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 RN7SL547P-201ENST00000490793 290 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 HAUS8P1-201ENST00000549005 542 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC007225.2-201ENST00000562529 256 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC000095.2-202ENST00000637415 154 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC88CQ9P219 AP000432.2-201ENST00000624164 2048 ntBASIC5.36□□□□□ -1.55
CCDC88CQ9P219 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AL354868.1-201ENST00000417077 482 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AL450023.1-201ENST00000450868 751 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 RPS17P15-201ENST00000475609 349 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 RN7SL570P-201ENST00000484405 292 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC027026.1-201ENST00000532323 742 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC079600.1-201ENST00000550326 297 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 HSPE1P2-201ENST00000554777 306 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 SUMO2P15-201ENST00000604285 278 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC024940.4-201ENST00000605507 246 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 NANOGP3-201ENST00000605855 286 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC079395.2-201ENST00000610982 737 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AL139099.4-201ENST00000614802 114 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 ADAM24P-201ENST00000398655 2101 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 RNA5SP91-201ENST00000390902 119 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 PRUNEP1-201ENST00000425846 705 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC023271.1-201ENST00000445936 1090 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 RPS4XP1-201ENST00000482189 787 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC105384.2-201ENST00000508433 640 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 RN7SKP253-201ENST00000516424 309 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC004948.1-201ENST00000609858 672 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AL691477.1-201ENST00000624398 162 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 AC068870.1-201ENST00000563737 2455 ntBASIC5.35□□□□□ -1.55
CCDC88CQ9P219 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms