Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 MTND4P10-201ENST00000446199 1363 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 RNU5B-4P-201ENST00000363508 111 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 RNA5SP346-201ENST00000363541 121 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 RNU6-468P-201ENST00000384003 109 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 U3.43-201ENST00000410734 213 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 ARAFP1-201ENST00000422172 605 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 RPS7P14-201ENST00000426405 583 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 FABP5P2-201ENST00000439042 408 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AL359265.1-201ENST00000440296 795 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AC073648.4-201ENST00000442655 781 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AC044797.1-201ENST00000445744 679 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 MGAT2P1-201ENST00000449718 797 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 SBDSP1-204ENST00000453858 737 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 FABP5P6-201ENST00000510588 409 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AC073581.1-201ENST00000519036 575 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 HMGB1P46-201ENST00000520062 610 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AP003396.4-201ENST00000527574 265 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 OR7E128P-201ENST00000532736 1024 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AC073916.1-201ENST00000545095 130 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AC025175.1-201ENST00000606482 759 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AL008723.3-201ENST00000608926 449 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 AC053481.2-202ENST00000582394 1500 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 PARP4P1-201ENST00000435945 2337 ntBASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
PDLIM7Q9NR12 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 MAPK10-287ENST00000641217 3037 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC105235.1-201ENST00000623208 1816 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms