Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU6-500P-201ENST00000362349 107 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 OR2T4-202ENST00000366475 1047 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 CBWD1-207ENST00000382447 1241 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SSU72Q9NP77 SNORA70H-201ENST00000383910 135 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 SNORA70J-201ENST00000384182 135 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 RNU6-549P-201ENST00000384433 107 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 RN7SKP89-201ENST00000410774 242 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 RN7SKP168-201ENST00000410910 300 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 TPMTP3-201ENST00000411928 735 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 PAICSP7-201ENST00000419829 962 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 ZNF863P-201ENST00000426746 417 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 ATP5F1P1-201ENST00000433775 569 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC241584.1-201ENST00000438469 1241 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 CYCSP44-201ENST00000448560 313 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AL358876.1-201ENST00000453364 1075 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 CDC42P1-201ENST00000456658 548 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AL603882.1-201ENST00000463059 681 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 RN7SL688P-201ENST00000471754 275 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SSU72Q9NP77 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC139272.1-201ENST00000505516 640 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC025252.2-201ENST00000537470 502 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 EGLN3P1-201ENST00000541727 720 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SSU72Q9NP77 DPPA3P2-201ENST00000553589 478 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC044860.3-201ENST00000559957 368 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AL031846.1-201ENST00000560933 314 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 MTCO1P40-201ENST00000574371 625 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 ABBA01006766.1-201ENST00000584728 294 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC097467.4-201ENST00000605504 141 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC004067.1-201ENST00000608733 700 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC012254.5-201ENST00000623573 478 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 OR7E161P-202ENST00000641994 1033 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 NCOA4P2-201ENST00000340589 1813 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SSU72Q9NP77 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SSU72Q9NP77 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SSU72Q9NP77 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SSU72Q9NP77 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC009779.8-201ENST00000641684 4384 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SSU72Q9NP77 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.84□□□□□ -1.32
SSU72Q9NP77 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.84□□□□□ -1.32
SSU72Q9NP77 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.84□□□□□ -1.32
SSU72Q9NP77 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
SSU72Q9NP77 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SSU72Q9NP77 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SSU72Q9NP77 PDZK1P1-202ENST00000425209 1350 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SSU72Q9NP77 SAMM50P1-201ENST00000455403 1399 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 MFSD8-256ENST00000641949 1640 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SSU72Q9NP77 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SSU72Q9NP77 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC011477.1-204ENST00000623416 1325 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SSU72Q9NP77 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SSU72Q9NP77 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SSU72Q9NP77 FAM32BP-201ENST00000344033 333 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 RNU6-797P-201ENST00000363101 109 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 RNU1-21P-201ENST00000363327 163 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 MIR181C-201ENST00000384881 110 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms