Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC008626.2-201ENST00000624425 248 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AC140479.4-205ENST00000636339 820 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AC087359.1-201ENST00000508335 1740 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AC109315.1-201ENST00000584143 1347 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC009220.2-201ENST00000489759 1751 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC009237.3-203ENST00000442128 3551 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 PWAR1-201ENST00000624188 2414 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 OR56B2P-201ENST00000317102 954 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 RN7SKP118-201ENST00000364331 330 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 Y_RNA.311-201ENST00000365068 96 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AL161449.1-201ENST00000414531 1199 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 PCBP2P1-201ENST00000437262 977 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 MTND2P4-201ENST00000445034 1004 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC026336.1-201ENST00000466577 351 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 RPL23AP80-201ENST00000495605 424 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC117532.1-201ENST00000514638 323 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AL132640.1-201ENST00000559594 619 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC068714.1-201ENST00000559623 800 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC133552.5-201ENST00000604266 540 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 RN7SL126P-201ENST00000616400 299 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC073869.7-201ENST00000640874 297 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 AC007842.1-201ENST00000597336 2039 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 ZNF542P-204ENST00000482727 1305 ntBASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRAIPQ9BWF2 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AL034546.1-201ENST00000623740 3693 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 MIR551B-201ENST00000384984 96 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 MIR187-201ENST00000385062 109 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms