Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC110998.1-201ENST00000519029 2053 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 AL022323.2-201ENST00000623239 3000 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC092718.7-201ENST00000623577 1776 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 NF1P2-201ENST00000556855 2505 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
USB1Q9BQ65 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 METTL15-204ENST00000407364 4242 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USB1Q9BQ65 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USB1Q9BQ65 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USB1Q9BQ65 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 AC073343.1-201ENST00000328239 651 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USB1Q9BQ65 Y_RNA.31-201ENST00000362574 102 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 COX6B1-202ENST00000392201 435 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 AL121972.1-201ENST00000402023 252 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 RN7SKP279-201ENST00000411383 298 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 BMP2KL-201ENST00000414251 1225 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 RPL7P4-203ENST00000430239 730 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 AC073346.1-202ENST00000430610 544 ntTSL 3 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 OR51R1P-201ENST00000435309 952 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 TXNP5-201ENST00000441043 315 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 AC012512.1-201ENST00000446594 718 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 AP1B1P1-202ENST00000448124 191 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 AL935212.3-201ENST00000450729 284 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 OR5S1P-201ENST00000453063 951 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 RPS12P20-201ENST00000464109 380 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 RPL38P4-201ENST00000502376 214 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 MTCO2P24-201ENST00000515611 426 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 RNA5SP460-201ENST00000516789 100 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 AL023284.4-201ENST00000564248 374 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 FRG2HP-201ENST00000568807 832 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 SS18L2P2-201ENST00000583960 235 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 GMFG-204ENST00000595636 487 ntTSL 2 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 DMKN-268ENST00000602781 827 ntAPPRIS ALT2 TSL 3 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 AC087645.3-201ENST00000624708 587 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USB1Q9BQ65 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
USB1Q9BQ65 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 SEPT4-202ENST00000317268 1784 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
USB1Q9BQ65 ERCC6-202ENST00000374127 1782 ntBASIC7.55□□□□□ -1.2
USB1Q9BQ65 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USB1Q9BQ65 AL590491.1-201ENST00000611916 1988 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USB1Q9BQ65 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USB1Q9BQ65 JADE1-202ENST00000413543 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
USB1Q9BQ65 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.55□□□□□ -1.2
USB1Q9BQ65 AC055716.2-201ENST00000552545 2441 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 DHRS9-201ENST00000357546 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 CDHR3-211ENST00000478080 2633 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 TDGF1P3-202ENST00000602699 2710 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 OR4G1P-203ENST00000641984 1631 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 RN7SKP44-201ENST00000363602 316 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms