Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 OR7A1P-202ENST00000641542 1158 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 MIR193BHG-214ENST00000641765 509 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF4Q92544 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF4Q92544 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF4Q92544 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF4Q92544 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 CR788268.1-201ENST00000603931 1809 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF4Q92544 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 AC138907.8-201ENST00000623981 2256 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF4Q92544 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF4Q92544 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 RNU1-150P-201ENST00000362491 162 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 RNA5SP375-201ENST00000362975 119 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 SNORD1C-201ENST00000363315 78 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 BRWD1P3-201ENST00000428816 390 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 RPS3AP38-201ENST00000435889 763 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 RPL23AP60-201ENST00000450011 454 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 RAB28P2-201ENST00000454299 641 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 IGLV2-28-201ENST00000520681 304 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 AC136777.2-201ENST00000522979 358 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 AC027544.3-201ENST00000535082 757 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 AC020916.2-201ENST00000591242 360 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 AC245128.3-201ENST00000594721 748 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF4Q92544 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF4Q92544 AC005014.3-201ENST00000605985 190 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 AC022467.1-201ENST00000614738 749 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 AC020763.5-201ENST00000623298 430 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 AP003400.2-201ENST00000624036 666 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 AL357562.1-201ENST00000624911 609 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 AP000550.3-201ENST00000637734 379 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF4Q92544 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF4Q92544 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 CASC19-260ENST00000641828 2001 ntBASIC5.53□□□□□ -1.52
TM9SF4Q92544 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.53□□□□□ -1.52
TM9SF4Q92544 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF4Q92544 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF4Q92544 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF4Q92544 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF4Q92544 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TM9SF4Q92544 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
TM9SF4Q92544 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TM9SF4Q92544 AC024587.1-201ENST00000505925 2157 ntBASIC5.52□□□□□ -1.53
TM9SF4Q92544 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
TM9SF4Q92544 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TM9SF4Q92544 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.52□□□□□ -1.53
TM9SF4Q92544 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.52□□□□□ -1.53
TM9SF4Q92544 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
TM9SF4Q92544 OR10R3P-201ENST00000361688 942 ntBASIC5.52□□□□□ -1.53
TM9SF4Q92544 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TM9SF4Q92544 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TM9SF4Q92544 OR3A2-201ENST00000408891 1076 ntBASIC5.52□□□□□ -1.53
TM9SF4Q92544 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.52□□□□□ -1.53
TM9SF4Q92544 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.52□□□□□ -1.53
TM9SF4Q92544 AL354868.1-201ENST00000417077 482 ntBASIC5.52□□□□□ -1.53
TM9SF4Q92544 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.52□□□□□ -1.53
TM9SF4Q92544 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.52□□□□□ -1.53
TM9SF4Q92544 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.52□□□□□ -1.53
TM9SF4Q92544 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.52□□□□□ -1.53
TM9SF4Q92544 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms