Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RTN4IP1Q8WWV3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RTN4IP1Q8WWV3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
RTN4IP1Q8WWV3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.71□□□□□ -1.65
RTN4IP1Q8WWV3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.71□□□□□ -1.65
RTN4IP1Q8WWV3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AC079097.1-201ENST00000512187 1399 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AC107977.1-201ENST00000355745 939 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 RN7SKP275-201ENST00000364626 301 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 RN7SKP29-201ENST00000410957 272 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 NDUFB4P8-201ENST00000435351 367 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 NDUFS5P5-201ENST00000437256 321 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 PCBP2P1-201ENST00000437262 977 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AC093166.4-201ENST00000457867 318 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 NXT1P1-201ENST00000458481 316 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 ATP5LP5-201ENST00000483050 299 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 ASNSP4-201ENST00000511103 447 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 RNA5SP438-201ENST00000516561 112 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 SEPT10P1-201ENST00000517342 1162 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AC138832.1-201ENST00000522871 556 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AC122688.1-201ENST00000541494 223 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 MIR4260-201ENST00000583107 67 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AC010487.1-201ENST00000594408 1172 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 FAM27E4-201ENST00000605259 342 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AC092944.2-201ENST00000605443 889 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 AL353684.1-201ENST00000622677 1120 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 MTND5P12-201ENST00000502851 1449 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.71□□□□□ -1.66
RTN4IP1Q8WWV3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 AC120036.2-201ENST00000509729 1474 ntBASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 RNA5SP326-201ENST00000363209 110 ntBASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 RNA5SP500-201ENST00000364486 119 ntBASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 MIR130A-201ENST00000385274 89 ntBASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 RNU2-18P-201ENST00000411224 162 ntBASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 AC017078.1-201ENST00000416146 368 ntBASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 RPL24P2-201ENST00000421023 475 ntBASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 CYCSP51-201ENST00000443545 318 ntBASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 AL359839.1-201ENST00000451975 1160 ntBASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 ACA64.1-201ENST00000459171 127 ntBASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 AC017007.3-201ENST00000479865 435 ntBASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms