Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AC010680.3-201ENST00000604215 520 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 SUGT1P3-202ENST00000604259 383 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AC007363.1-201ENST00000604736 620 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 OR4G11P-202ENST00000642116 1414 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 GDI2P1-201ENST00000429312 1336 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 Y_RNA.263-201ENST00000364659 114 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 Y_RNA.295-201ENST00000364918 102 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC073264.1-201ENST00000411508 416 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 FDPSP1-201ENST00000424976 1071 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 GAPDHP51-201ENST00000426454 1000 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC109583.1-201ENST00000432156 268 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC092106.2-201ENST00000436597 487 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 YWHAQP9-201ENST00000445891 512 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 RN7SL368P-201ENST00000473384 277 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 MARK2P8-201ENST00000476069 952 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 ACTR3P3-201ENST00000480448 893 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC026412.2-201ENST00000512270 1075 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC025465.4-201ENST00000513422 638 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 RN7SKP2-201ENST00000517003 319 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AF279873.3-201ENST00000523063 766 ntTSL 3 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC007751.2-201ENST00000534173 291 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AK6P1-201ENST00000540219 478 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC048344.2-201ENST00000547280 147 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC090751.1-201ENST00000566966 267 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC012146.2-201ENST00000576545 416 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC009977.1-201ENST00000586015 570 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC010327.2-201ENST00000587647 488 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC005261.5-201ENST00000596280 355 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC018737.1-201ENST00000603900 204 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC008115.3-201ENST00000614874 549 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 MLECP1-201ENST00000615893 709 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC231657.1-201ENST00000624313 397 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 FER-210ENST00000628534 558 ntTSL 5 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 MIR1321-201ENST00000637766 79 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms