Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VRK3Q8IV63 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VRK3Q8IV63 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VRK3Q8IV63 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VRK3Q8IV63 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VRK3Q8IV63 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VRK3Q8IV63 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VRK3Q8IV63 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 RPL5P19-201ENST00000404228 893 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 AMZ2P2-201ENST00000406819 1057 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 SLC20A1P1-201ENST00000413906 956 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC013268.2-201ENST00000420753 337 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC010099.3-201ENST00000423896 409 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 RPL7AP14-201ENST00000424041 802 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC023141.3-201ENST00000436698 278 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AL513321.1-201ENST00000441175 761 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 XKRY2-201ENST00000442362 1093 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 MTCO3P16-201ENST00000454456 754 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 RPL32P14-201ENST00000463196 378 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 MTCO3P35-201ENST00000485582 781 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 LAMTOR3P2-201ENST00000504479 232 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 SUMO2P5-201ENST00000506790 245 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC108157.1-201ENST00000510511 539 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 MAST4-IT1-201ENST00000514241 658 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 Vault.2-201ENST00000516519 98 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VRK3Q8IV63 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 MIR3154-201ENST00000577829 84 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AC124916.2-201ENST00000604416 224 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 OR7A19P-201ENST00000608051 733 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 AL512652.1-201ENST00000619006 500 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VRK3Q8IV63 AL596275.2-207ENST00000641188 675 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 AL359091.1-201ENST00000449048 1734 ntBASIC6.01□□□□□ -1.45
VRK3Q8IV63 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VRK3Q8IV63 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
VRK3Q8IV63 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VRK3Q8IV63 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
VRK3Q8IV63 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
VRK3Q8IV63 AC021755.1-201ENST00000559747 1447 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
VRK3Q8IV63 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6□□□□□ -1.45
VRK3Q8IV63 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VRK3Q8IV63 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6□□□□□ -1.45
VRK3Q8IV63 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6□□□□□ -1.45
VRK3Q8IV63 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6□□□□□ -1.45
VRK3Q8IV63 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VRK3Q8IV63 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6□□□□□ -1.45
VRK3Q8IV63 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
VRK3Q8IV63 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6□□□□□ -1.45
VRK3Q8IV63 SNORA21-201ENST00000362423 132 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 RNU6-618P-201ENST00000363518 112 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 SNORD115-48-201ENST00000364764 76 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VRK3Q8IV63 AL360271.1-201ENST00000395679 510 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 RNU6-648P-201ENST00000410190 107 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 AC096533.1-201ENST00000411645 353 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6□□□□□ -1.45
VRK3Q8IV63 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6□□□□□ -1.45
VRK3Q8IV63 ZNF965P-201ENST00000432501 817 ntBASIC6□□□□□ -1.45
VRK3Q8IV63 AC079922.1-201ENST00000443291 359 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms