Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RPS17P5-201ENST00000498293 408 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 OR5H7P-201ENST00000514084 930 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 SCARNA18.1-201ENST00000516330 83 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 AC060775.1-201ENST00000518241 520 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 AL136131.3-201ENST00000607600 188 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 Z95327.3-201ENST00000610385 572 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 FO681491.1-202ENST00000623392 737 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 AC099654.11-201ENST00000638857 294 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC28Q86X40 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC28Q86X40 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC28Q86X40 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC28Q86X40 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC28Q86X40 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC28Q86X40 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC28Q86X40 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC28Q86X40 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRC28Q86X40 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC28Q86X40 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LRRC28Q86X40 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.04□□□□□ -1.6
LRRC28Q86X40 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC28Q86X40 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC28Q86X40 RNA5SP273-201ENST00000362484 113 ntBASIC5.04□□□□□ -1.6
LRRC28Q86X40 RNA5SP477-201ENST00000362639 119 ntBASIC5.04□□□□□ -1.6
LRRC28Q86X40 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LRRC28Q86X40 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LRRC28Q86X40 AL096711.1-201ENST00000404780 554 ntBASIC5.04□□□□□ -1.6
LRRC28Q86X40 HMGN1P20-201ENST00000411849 300 ntBASIC5.04□□□□□ -1.6
LRRC28Q86X40 RPL35AP3-201ENST00000414680 288 ntBASIC5.04□□□□□ -1.6
LRRC28Q86X40 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.04□□□□□ -1.6
LRRC28Q86X40 AC023245.1-201ENST00000468501 517 ntBASIC5.04□□□□□ -1.6
LRRC28Q86X40 RN7SL193P-201ENST00000491708 276 ntBASIC5.04□□□□□ -1.6
LRRC28Q86X40 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRC28Q86X40 SETP21-201ENST00000514799 892 ntBASIC5.04□□□□□ -1.6
LRRC28Q86X40 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.04□□□□□ -1.6
LRRC28Q86X40 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRC28Q86X40 WBP1LP3-201ENST00000523033 208 ntBASIC5.04□□□□□ -1.6
LRRC28Q86X40 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRC28Q86X40 NMNAT1P5-201ENST00000559657 841 ntBASIC5.04□□□□□ -1.6
LRRC28Q86X40 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRC28Q86X40 MIR6809-201ENST00000612189 116 ntBASIC5.04□□□□□ -1.6
LRRC28Q86X40 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRC28Q86X40 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC28Q86X40 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC28Q86X40 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
LRRC28Q86X40 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
LRRC28Q86X40 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
LRRC28Q86X40 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC28Q86X40 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC28Q86X40 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRC28Q86X40 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC28Q86X40 AF287957.1-201ENST00000607368 1595 ntBASIC5.04□□□□□ -1.6
LRRC28Q86X40 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC28Q86X40 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
LRRC28Q86X40 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC28Q86X40 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC28Q86X40 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
LRRC28Q86X40 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC28Q86X40 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.03□□□□□ -1.6
LRRC28Q86X40 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC28Q86X40 HSPD1P7-201ENST00000447985 1686 ntBASIC5.03□□□□□ -1.6
LRRC28Q86X40 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC28Q86X40 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRC28Q86X40 OR7E25P-201ENST00000344844 931 ntBASIC5.03□□□□□ -1.6
LRRC28Q86X40 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC28Q86X40 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LRRC28Q86X40 SLC20A1P1-201ENST00000413906 956 ntBASIC5.03□□□□□ -1.6
LRRC28Q86X40 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRC28Q86X40 AC015983.1-201ENST00000441577 373 ntBASIC5.03□□□□□ -1.6
LRRC28Q86X40 TCEA1P3-201ENST00000443005 880 ntBASIC5.03□□□□□ -1.6
LRRC28Q86X40 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRC28Q86X40 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRC28Q86X40 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRC28Q86X40 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRC28Q86X40 ACA64.1-201ENST00000459171 127 ntBASIC5.03□□□□□ -1.6
LRRC28Q86X40 PSAT1P4-201ENST00000466500 526 ntBASIC5.03□□□□□ -1.6
LRRC28Q86X40 RN7SL269P-201ENST00000467795 305 ntBASIC5.03□□□□□ -1.6
LRRC28Q86X40 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC28Q86X40 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.03□□□□□ -1.6
LRRC28Q86X40 COX6B1P2-201ENST00000489624 230 ntBASIC5.03□□□□□ -1.6
LRRC28Q86X40 SUMO2P4-201ENST00000504193 276 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms