Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 PFN1P8-201ENST00000497012 543 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 ATG10-AS1-201ENST00000504846 648 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AC027369.2-201ENST00000528030 440 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AC006115.2-201ENST00000596823 202 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AL499605.1-201ENST00000604628 403 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AC019131.2-201ENST00000609071 870 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AC239803.2-201ENST00000610161 430 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AL352984.2-202ENST00000613699 155 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AL355974.3-201ENST00000617383 467 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AC069234.4-201ENST00000621276 412 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 OR5T3-201ENST00000303059 1023 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 RNU6-670P-201ENST00000364312 104 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AL607077.1-201ENST00000401718 499 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AL136116.2-201ENST00000404020 785 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 SNORA77.2-201ENST00000408571 112 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 RNU6-564P-201ENST00000410983 104 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 GLUD1P9-201ENST00000420997 1173 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 RPL31P20-201ENST00000449593 360 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 NPM1P39-201ENST00000449818 867 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 MTND3P4-201ENST00000453537 303 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AC023245.1-201ENST00000468501 517 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 RN7SKP238-201ENST00000516483 249 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 OR8X1P-201ENST00000534542 869 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AP002373.2-201ENST00000541631 1060 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AC244502.2-201ENST00000543361 851 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AC079905.1-201ENST00000549280 475 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 SULT1C2P2-201ENST00000562517 294 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AL136131.3-201ENST00000607600 188 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 MIR6071-201ENST00000616741 78 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AC024884.1-201ENST00000620583 399 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AC129778.1-202ENST00000623812 261 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AL591379.1-207ENST00000635982 261 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 THAP12P9-201ENST00000503971 2360 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 MRRFP1-201ENST00000435941 1675 ntBASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUP54Q7Z3B4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 UGT2B26P-201ENST00000508672 1613 ntBASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 AC087565.3-202ENST00000642085 1603 ntBASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 AC007342.7-201ENST00000624610 2337 ntBASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms