Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 RPL12P18-201ENST00000437175 325 ntBASIC6.8□□□□□ -1.32
CTR9Q6PD62 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.8□□□□□ -1.32
CTR9Q6PD62 OR7E116P-201ENST00000448529 957 ntBASIC6.8□□□□□ -1.32
CTR9Q6PD62 RN7SL72P-201ENST00000460697 269 ntBASIC6.8□□□□□ -1.32
CTR9Q6PD62 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 AC109481.1-201ENST00000509173 282 ntBASIC6.8□□□□□ -1.32
CTR9Q6PD62 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 snoU109.5-201ENST00000516231 132 ntBASIC6.8□□□□□ -1.32
CTR9Q6PD62 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 IGBP1P1-201ENST00000554337 1009 ntBASIC6.8□□□□□ -1.32
CTR9Q6PD62 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 AC006363.1-201ENST00000603806 463 ntBASIC6.8□□□□□ -1.32
CTR9Q6PD62 AC104695.2-201ENST00000605056 775 ntBASIC6.8□□□□□ -1.32
CTR9Q6PD62 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 MIR6886-201ENST00000619864 61 ntBASIC6.8□□□□□ -1.32
CTR9Q6PD62 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 AC109446.4-201ENST00000623235 2755 ntBASIC6.8□□□□□ -1.32
CTR9Q6PD62 MAPK10-350ENST00000641777 965 ntBASIC6.8□□□□□ -1.32
CTR9Q6PD62 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CTR9Q6PD62 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.8□□□□□ -1.32
CTR9Q6PD62 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CTR9Q6PD62 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CTR9Q6PD62 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CTR9Q6PD62 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTR9Q6PD62 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 MIR130A-201ENST00000385274 89 ntBASIC6.79□□□□□ -1.32
CTR9Q6PD62 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 OR6E1P-201ENST00000414424 923 ntBASIC6.79□□□□□ -1.32
CTR9Q6PD62 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 AL513325.1-201ENST00000417716 1034 ntBASIC6.79□□□□□ -1.32
CTR9Q6PD62 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 AC114982.2-201ENST00000461396 358 ntBASIC6.79□□□□□ -1.32
CTR9Q6PD62 DUTP1-201ENST00000493631 470 ntBASIC6.79□□□□□ -1.32
CTR9Q6PD62 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 AC136777.2-201ENST00000522979 358 ntBASIC6.79□□□□□ -1.32
CTR9Q6PD62 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 AC008115.3-201ENST00000614874 549 ntBASIC6.79□□□□□ -1.32
CTR9Q6PD62 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTR9Q6PD62 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTR9Q6PD62 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CTR9Q6PD62 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CTR9Q6PD62 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.79□□□□□ -1.32
CTR9Q6PD62 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTR9Q6PD62 AC114786.1-201ENST00000512892 1415 ntBASIC6.78□□□□□ -1.32
CTR9Q6PD62 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CTR9Q6PD62 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
CTR9Q6PD62 SNORA51.1-201ENST00000363243 140 ntBASIC6.78□□□□□ -1.32
CTR9Q6PD62 RNA5SP30-201ENST00000365552 115 ntBASIC6.78□□□□□ -1.32
CTR9Q6PD62 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.78□□□□□ -1.32
CTR9Q6PD62 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CTR9Q6PD62 U3.25-201ENST00000391209 220 ntBASIC6.78□□□□□ -1.32
CTR9Q6PD62 RMRPP5-201ENST00000411156 267 ntBASIC6.78□□□□□ -1.32
CTR9Q6PD62 OR2AT2P-201ENST00000413438 905 ntBASIC6.78□□□□□ -1.32
CTR9Q6PD62 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.78□□□□□ -1.32
CTR9Q6PD62 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.78□□□□□ -1.32
CTR9Q6PD62 FMO7P-201ENST00000436045 768 ntBASIC6.78□□□□□ -1.32
CTR9Q6PD62 AC079080.1-201ENST00000479841 822 ntBASIC6.78□□□□□ -1.32
CTR9Q6PD62 MORF4L2P1-201ENST00000503761 858 ntBASIC6.78□□□□□ -1.32
CTR9Q6PD62 AC011411.1-201ENST00000509592 876 ntBASIC6.78□□□□□ -1.32
CTR9Q6PD62 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.78□□□□□ -1.32
CTR9Q6PD62 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
CTR9Q6PD62 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.78□□□□□ -1.32
CTR9Q6PD62 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.78□□□□□ -1.32
CTR9Q6PD62 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.78□□□□□ -1.32
CTR9Q6PD62 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.78□□□□□ -1.32
CTR9Q6PD62 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTR9Q6PD62 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTR9Q6PD62 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTR9Q6PD62 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTR9Q6PD62 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CTR9Q6PD62 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTR9Q6PD62 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTR9Q6PD62 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CTR9Q6PD62 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTR9Q6PD62 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.77□□□□□ -1.33
CTR9Q6PD62 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CTR9Q6PD62 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms