Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 RN7SKP273-201ENST00000411392 314 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 MTND4LP21-201ENST00000415303 295 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AC015983.1-201ENST00000441577 373 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 RN7SL165P-201ENST00000477476 291 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 RPSAP50-201ENST00000481955 852 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 MTND3P6-201ENST00000485242 339 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AC072052.1-201ENST00000496556 306 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 CYP4F27P-201ENST00000514557 494 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 MIR2117-201ENST00000516780 80 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AC025423.2-201ENST00000537570 439 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 MIR132-201ENST00000591554 101 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AC020658.4-201ENST00000613987 684 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AL356752.1-201ENST00000615844 593 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AC068870.2-201ENST00000620635 389 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AL596275.2-208ENST00000641192 594 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 SNORD8-201ENST00000363915 110 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 RNU1-77P-201ENST00000390868 162 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 NIFKP3-201ENST00000417799 865 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 AC007562.1-201ENST00000421819 517 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 AC019185.1-201ENST00000442718 389 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 AC023274.2-201ENST00000445264 521 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 FAR2P1-206ENST00000449736 709 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 OR52Y1P-201ENST00000452418 828 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 AC104849.1-201ENST00000462623 405 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 RPS21P4-201ENST00000487122 248 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 RN7SL808P-201ENST00000496066 299 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 RN7SKP288-201ENST00000516227 268 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 RN7SKP99-201ENST00000517028 307 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 AC009303.3-201ENST00000591103 736 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 AL445222.1-201ENST00000607259 628 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 MIR6748-201ENST00000610433 71 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 MTCO1P1-201ENST00000624263 1081 ntBASIC5.65□□□□□ -1.5
LYSMD4Q5XG99 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.65□□□□□ -1.51
LYSMD4Q5XG99 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
LYSMD4Q5XG99 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
LYSMD4Q5XG99 AL353763.1-201ENST00000624467 1628 ntBASIC5.65□□□□□ -1.51
LYSMD4Q5XG99 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
LYSMD4Q5XG99 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
LYSMD4Q5XG99 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LYSMD4Q5XG99 AL034546.1-201ENST00000623740 3693 ntBASIC5.65□□□□□ -1.51
LYSMD4Q5XG99 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LYSMD4Q5XG99 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.65□□□□□ -1.51
LYSMD4Q5XG99 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LYSMD4Q5XG99 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LYSMD4Q5XG99 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LYSMD4Q5XG99 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LYSMD4Q5XG99 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LYSMD4Q5XG99 AC007938.2-201ENST00000604666 2634 ntBASIC5.64□□□□□ -1.51
LYSMD4Q5XG99 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.64□□□□□ -1.51
LYSMD4Q5XG99 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
LYSMD4Q5XG99 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.64□□□□□ -1.51
LYSMD4Q5XG99 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.64□□□□□ -1.51
LYSMD4Q5XG99 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
LYSMD4Q5XG99 LINC01963-201ENST00000562038 3148 ntBASIC5.64□□□□□ -1.51
LYSMD4Q5XG99 AC009779.8-201ENST00000641684 4384 ntBASIC5.64□□□□□ -1.51
LYSMD4Q5XG99 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms