Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 EIF5AP4-201ENST00000441206 465 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX4Q33E94 GEMIN2P1-201ENST00000454246 752 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX4Q33E94 DUTP1-201ENST00000493631 470 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 AC106822.1-201ENST00000502647 526 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 AC112484.3-201ENST00000505910 329 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 AC016559.2-201ENST00000510759 359 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX4Q33E94 FTH1P11-201ENST00000517577 551 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 OR8A2P-201ENST00000528631 952 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX4Q33E94 AC121758.1-202ENST00000556917 658 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
RFX4Q33E94 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.22□□□□□ -1.57
RFX4Q33E94 AGGF1P7-201ENST00000562369 913 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX4Q33E94 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX4Q33E94 AC005828.7-201ENST00000607331 556 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX4Q33E94 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX4Q33E94 uc_338.31-201ENST00000615595 186 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 AL136228.1-201ENST00000622221 319 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX4Q33E94 Z95331.1-201ENST00000623075 23112 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.22□□□□□ -1.57
RFX4Q33E94 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX4Q33E94 QRSL1P1-201ENST00000400977 1540 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RFX4Q33E94 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RFX4Q33E94 PROS2P-201ENST00000474651 1951 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.21□□□□□ -1.57
RFX4Q33E94 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
RFX4Q33E94 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX4Q33E94 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
RFX4Q33E94 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RFX4Q33E94 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFX4Q33E94 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX4Q33E94 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.21□□□□□ -1.58
RFX4Q33E94 AL096711.1-201ENST00000404780 554 ntBASIC5.21□□□□□ -1.58
RFX4Q33E94 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX4Q33E94 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX4Q33E94 HSPD1P12-201ENST00000429127 1069 ntBASIC5.21□□□□□ -1.58
RFX4Q33E94 AC007679.3-201ENST00000434035 414 ntBASIC5.21□□□□□ -1.58
RFX4Q33E94 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFX4Q33E94 TUBB4BP6-201ENST00000437576 479 ntBASIC5.21□□□□□ -1.58
RFX4Q33E94 RPL5P7-201ENST00000444235 813 ntBASIC5.21□□□□□ -1.58
RFX4Q33E94 AC097463.1-201ENST00000447288 481 ntBASIC5.21□□□□□ -1.58
RFX4Q33E94 AC005077.1-201ENST00000449226 375 ntBASIC5.21□□□□□ -1.58
RFX4Q33E94 OR52I1-201ENST00000450052 1050 ntBASIC5.21□□□□□ -1.58
RFX4Q33E94 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX4Q33E94 PRMT5P1-201ENST00000514351 598 ntBASIC5.21□□□□□ -1.58
RFX4Q33E94 RN7SKP253-201ENST00000516424 309 ntBASIC5.21□□□□□ -1.58
RFX4Q33E94 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.21□□□□□ -1.58
RFX4Q33E94 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX4Q33E94 OR5AM1P-201ENST00000532136 1032 ntBASIC5.21□□□□□ -1.58
RFX4Q33E94 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX4Q33E94 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.21□□□□□ -1.58
RFX4Q33E94 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.21□□□□□ -1.58
RFX4Q33E94 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.21□□□□□ -1.58
RFX4Q33E94 AC002519.2-203ENST00000567043 837 ntBASIC5.21□□□□□ -1.58
RFX4Q33E94 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFX4Q33E94 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.21□□□□□ -1.58
RFX4Q33E94 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFX4Q33E94 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.21□□□□□ -1.58
RFX4Q33E94 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFX4Q33E94 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
RFX4Q33E94 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFX4Q33E94 AC027088.4-201ENST00000611559 1947 ntBASIC5.21□□□□□ -1.58
RFX4Q33E94 AC022417.1-201ENST00000624768 1303 ntBASIC5.21□□□□□ -1.58
RFX4Q33E94 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RFX4Q33E94 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFX4Q33E94 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.21□□□□□ -1.58
RFX4Q33E94 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RFX4Q33E94 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX4Q33E94 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX4Q33E94 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX4Q33E94 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.2□□□□□ -1.58
RFX4Q33E94 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.2□□□□□ -1.58
RFX4Q33E94 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RFX4Q33E94 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RFX4Q33E94 RBBP4P5-201ENST00000398583 1266 ntBASIC5.2□□□□□ -1.58
RFX4Q33E94 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX4Q33E94 COX5BP7-201ENST00000414780 274 ntBASIC5.2□□□□□ -1.58
RFX4Q33E94 AL359885.1-201ENST00000415786 903 ntBASIC5.2□□□□□ -1.58
RFX4Q33E94 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.2□□□□□ -1.58
RFX4Q33E94 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.2□□□□□ -1.58
RFX4Q33E94 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.2□□□□□ -1.58
RFX4Q33E94 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.2□□□□□ -1.58
RFX4Q33E94 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.2□□□□□ -1.58
RFX4Q33E94 AC090589.1-201ENST00000473109 362 ntBASIC5.2□□□□□ -1.58
RFX4Q33E94 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.2□□□□□ -1.58
RFX4Q33E94 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.2□□□□□ -1.58
RFX4Q33E94 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.2□□□□□ -1.58
RFX4Q33E94 SUMO2P4-201ENST00000504193 276 ntBASIC5.2□□□□□ -1.58
RFX4Q33E94 AL158068.1-201ENST00000506116 616 ntBASIC5.2□□□□□ -1.58
RFX4Q33E94 AC091912.1-201ENST00000511351 248 ntBASIC5.2□□□□□ -1.58
RFX4Q33E94 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX4Q33E94 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms