Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.24□□□□□ -1.41
GFRA1P56159 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.24□□□□□ -1.41
GFRA1P56159 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.24□□□□□ -1.41
GFRA1P56159 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
GFRA1P56159 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.24□□□□□ -1.41
GFRA1P56159 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.24□□□□□ -1.41
GFRA1P56159 SPATA31C2-201ENST00000324915 3777 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AC095038.1-201ENST00000429248 1591 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.24□□□□□ -1.41
GFRA1P56159 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 AC092111.1-201ENST00000618256 3358 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 HMGB1P5-201ENST00000255320 642 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 RN7SKP118-201ENST00000364331 330 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 RN7SKP189-201ENST00000365042 330 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 RN7SKP47-201ENST00000365347 328 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.24□□□□□ -1.41
GFRA1P56159 RNU6-98P-201ENST00000384173 107 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 RNU6-253P-201ENST00000384730 105 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
GFRA1P56159 SNORA26.8-201ENST00000391306 124 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 AL136100.1-201ENST00000407696 330 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 SNORA11C-201ENST00000408532 129 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 RN7SKP273-201ENST00000411392 314 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.24□□□□□ -1.41
GFRA1P56159 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
GFRA1P56159 OR5BE1P-201ENST00000425977 939 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 CYP4F32P-201ENST00000426492 504 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AP001324.1-201ENST00000428553 399 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.24□□□□□ -1.41
GFRA1P56159 MTCO1P54-201ENST00000430139 712 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.24□□□□□ -1.41
GFRA1P56159 HMGB3P10-201ENST00000434734 572 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 CACYBPP1-201ENST00000438592 684 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.24□□□□□ -1.41
GFRA1P56159 DEFA11P-201ENST00000446470 261 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 GAPDHP16-201ENST00000448152 962 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 FAR2P1-206ENST00000449736 709 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 GOT2P2-201ENST00000450663 1251 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.24□□□□□ -1.41
GFRA1P56159 RPSAP24-201ENST00000461543 873 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AC135721.2-201ENST00000464237 300 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 RPS4XP23-201ENST00000487801 237 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.24□□□□□ -1.41
GFRA1P56159 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.24□□□□□ -1.41
GFRA1P56159 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.24□□□□□ -1.41
GFRA1P56159 RNA5SP278-201ENST00000517055 102 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 MTND1P5-201ENST00000517906 940 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 EEF1B2P2-201ENST00000519625 676 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 HIGD1AP10-201ENST00000527837 282 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 OR9L1P-201ENST00000529493 933 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 OR4A21P-201ENST00000532759 944 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AC022880.1-201ENST00000534017 973 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AC005832.3-201ENST00000537929 631 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 NXPE2P1-201ENST00000543705 726 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 POLR2KP1-201ENST00000553226 168 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 AC004825.1-201ENST00000555068 586 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.24□□□□□ -1.41
GFRA1P56159 PPIAP6-201ENST00000557078 499 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AC010287.1-201ENST00000566916 357 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.24□□□□□ -1.41
GFRA1P56159 AC012435.1-202ENST00000568772 240 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.24□□□□□ -1.41
GFRA1P56159 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC6.24□□□□□ -1.41
GFRA1P56159 AC010546.1-201ENST00000569391 485 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 ZNF415P1-201ENST00000582279 1166 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AL137000.1-201ENST00000610528 1244 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AL353726.1-201ENST00000614041 1000 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AC023158.2-201ENST00000614876 543 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 MRPL57P3-201ENST00000619218 176 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 AL356121.2-201ENST00000624715 780 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.24□□□□□ -1.41
GFRA1P56159 AC116618.1-201ENST00000634617 774 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.24□□□□□ -1.41
GFRA1P56159 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
GFRA1P56159 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.24□□□□□ -1.41
GFRA1P56159 OR5BE1P-202ENST00000641168 1176 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms