Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH13P55290 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH13P55290 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH13P55290 AC084824.2-201ENST00000548906 345 ntBASIC5.62□□□□□ -1.51
CDH13P55290 AC008126.1-201ENST00000549019 480 ntBASIC5.62□□□□□ -1.51
CDH13P55290 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH13P55290 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CDH13P55290 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH13P55290 AC084036.1-201ENST00000609190 508 ntBASIC5.62□□□□□ -1.51
CDH13P55290 AC092266.1-201ENST00000610958 165 ntBASIC5.62□□□□□ -1.51
CDH13P55290 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH13P55290 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH13P55290 AC119674.1-220ENST00000641502 1048 ntBASIC5.62□□□□□ -1.51
CDH13P55290 AC117409.1-201ENST00000470499 1310 ntBASIC5.62□□□□□ -1.51
CDH13P55290 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH13P55290 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH13P55290 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH13P55290 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH13P55290 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH13P55290 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH13P55290 AC245100.2-201ENST00000454544 1679 ntBASIC5.62□□□□□ -1.51
CDH13P55290 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CDH13P55290 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH13P55290 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH13P55290 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH13P55290 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH13P55290 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH13P55290 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH13P55290 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH13P55290 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDH13P55290 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH13P55290 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDH13P55290 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDH13P55290 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH13P55290 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH13P55290 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH13P55290 RNA5SP232-201ENST00000364144 119 ntBASIC5.61□□□□□ -1.51
CDH13P55290 RN7SKP171-201ENST00000364417 303 ntBASIC5.61□□□□□ -1.51
CDH13P55290 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH13P55290 RNU1-136P-201ENST00000384181 164 ntBASIC5.61□□□□□ -1.51
CDH13P55290 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH13P55290 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CDH13P55290 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH13P55290 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH13P55290 DPPA2P2-201ENST00000418220 897 ntBASIC5.61□□□□□ -1.51
CDH13P55290 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH13P55290 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH13P55290 ATP5LP2-201ENST00000440646 311 ntBASIC5.61□□□□□ -1.51
CDH13P55290 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH13P55290 TXNP2-201ENST00000443918 295 ntBASIC5.61□□□□□ -1.51
CDH13P55290 OR7E116P-201ENST00000448529 957 ntBASIC5.61□□□□□ -1.51
CDH13P55290 RPL31P20-201ENST00000449593 360 ntBASIC5.61□□□□□ -1.51
CDH13P55290 AC021006.1-201ENST00000489849 553 ntBASIC5.61□□□□□ -1.51
CDH13P55290 DUTP1-201ENST00000493631 470 ntBASIC5.61□□□□□ -1.51
CDH13P55290 OR7E157P-201ENST00000494376 911 ntBASIC5.61□□□□□ -1.51
CDH13P55290 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH13P55290 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH13P55290 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH13P55290 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH13P55290 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH13P55290 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH13P55290 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH13P55290 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH13P55290 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH13P55290 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH13P55290 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH13P55290 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH13P55290 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH13P55290 AC002519.2-203ENST00000567043 837 ntBASIC5.61□□□□□ -1.51
CDH13P55290 MIR4776-2-201ENST00000580204 80 ntBASIC5.61□□□□□ -1.51
CDH13P55290 MIR4433B-201ENST00000581329 102 ntBASIC5.61□□□□□ -1.51
CDH13P55290 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH13P55290 AF287957.1-201ENST00000607368 1595 ntBASIC5.61□□□□□ -1.51
CDH13P55290 AL136131.3-201ENST00000607600 188 ntBASIC5.61□□□□□ -1.51
CDH13P55290 AC016745.2-201ENST00000608834 3443 ntBASIC5.61□□□□□ -1.51
CDH13P55290 AC108673.3-201ENST00000609183 335 ntBASIC5.61□□□□□ -1.51
CDH13P55290 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH13P55290 AC025262.3-201ENST00000623666 360 ntBASIC5.61□□□□□ -1.51
CDH13P55290 AC004808.2-201ENST00000627965 773 ntBASIC5.61□□□□□ -1.51
CDH13P55290 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH13P55290 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CDH13P55290 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH13P55290 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CDH13P55290 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH13P55290 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.6□□□□□ -1.51
CDH13P55290 AC093225.1-201ENST00000506867 1408 ntBASIC5.6□□□□□ -1.51
CDH13P55290 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.6□□□□□ -1.51
CDH13P55290 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH13P55290 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH13P55290 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH13P55290 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH13P55290 AC096921.1-201ENST00000411661 375 ntBASIC5.6□□□□□ -1.51
CDH13P55290 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms