Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC9.15□□□□□ -0.94
PSEN1P49768 EIF5AP3-201ENST00000589460 462 ntBASIC9.15□□□□□ -0.94
PSEN1P49768 AC026150.3-201ENST00000602595 499 ntBASIC9.15□□□□□ -0.94
PSEN1P49768 AC002059.1-201ENST00000608014 477 ntBASIC9.15□□□□□ -0.94
PSEN1P49768 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC9.15□□□□□ -0.94
PSEN1P49768 Metazoa_SRP.176-201ENST00000619772 282 ntBASIC9.15□□□□□ -0.94
PSEN1P49768 AC078909.2-201ENST00000620584 398 ntBASIC9.15□□□□□ -0.94
PSEN1P49768 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC9.15□□□□□ -0.94
PSEN1P49768 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC9.15□□□□□ -0.94
PSEN1P49768 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC9.15□□□□□ -0.94
PSEN1P49768 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PSEN1P49768 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC9.15□□□□□ -0.94
PSEN1P49768 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
PSEN1P49768 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PSEN1P49768 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.95
PSEN1P49768 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
PSEN1P49768 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
PSEN1P49768 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.95
PSEN1P49768 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
PSEN1P49768 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.95
PSEN1P49768 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
PSEN1P49768 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.95
PSEN1P49768 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
PSEN1P49768 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
PSEN1P49768 AP004289.1-201ENST00000436307 2205 ntBASIC9.15□□□□□ -0.95
PSEN1P49768 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
PSEN1P49768 AC245060.6-201ENST00000624350 8420 ntBASIC9.15□□□□□ -0.95
PSEN1P49768 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC9.15□□□□□ -0.95
PSEN1P49768 NCKAP1L-202ENST00000545638 3612 ntTSL 2 BASIC9.14□□□□□ -0.95
PSEN1P49768 AC068870.3-201ENST00000625077 2536 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC9.14□□□□□ -0.95
PSEN1P49768 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PSEN1P49768 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PSEN1P49768 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PSEN1P49768 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PSEN1P49768 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PSEN1P49768 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC9.14□□□□□ -0.95
PSEN1P49768 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PSEN1P49768 TPH2-201ENST00000333850 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PSEN1P49768 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
PSEN1P49768 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PSEN1P49768 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
PSEN1P49768 MALAT1-202ENST00000534336 8708 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PSEN1P49768 Y_RNA.5-201ENST00000362334 102 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 RNU6-289P-201ENST00000364093 107 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 SNORA55-201ENST00000364587 135 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 RNU6-99P-201ENST00000364721 107 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC9.14□□□□□ -0.95
PSEN1P49768 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC9.14□□□□□ -0.95
PSEN1P49768 HNRNPDLP1-201ENST00000412834 550 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 AC007562.1-201ENST00000421819 517 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC9.14□□□□□ -0.95
PSEN1P49768 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC9.14□□□□□ -0.95
PSEN1P49768 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC9.14□□□□□ -0.95
PSEN1P49768 RPSAP8-201ENST00000429844 889 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 RPL34P6-201ENST00000432390 345 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 AC004006.1-201ENST00000434994 377 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC9.14□□□□□ -0.95
PSEN1P49768 RPL31P44-201ENST00000447680 377 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 RPSAP64-201ENST00000451820 336 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 LINC01883-201ENST00000457385 380 ntTSL 2 BASIC9.14□□□□□ -0.95
PSEN1P49768 IFNA22P-201ENST00000458710 570 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 AC025062.1-201ENST00000465163 644 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 AC128713.1-201ENST00000471495 306 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 RN7SL448P-201ENST00000475566 295 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC9.14□□□□□ -0.95
PSEN1P49768 HMGB3P17-201ENST00000504195 649 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC9.14□□□□□ -0.95
PSEN1P49768 RNU4-29P-201ENST00000515943 174 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 Y_RNA.665-201ENST00000516177 98 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 RPS20-202ENST00000518875 671 ntTSL 2 BASIC9.14□□□□□ -0.95
PSEN1P49768 IGLV1-41-201ENST00000519790 406 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC9.14□□□□□ -0.95
PSEN1P49768 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC9.14□□□□□ -0.95
PSEN1P49768 AC073896.5-201ENST00000546464 542 ntTSL 5 BASIC9.14□□□□□ -0.95
PSEN1P49768 COX5AP2-201ENST00000554418 394 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC9.14□□□□□ -0.95
PSEN1P49768 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
PSEN1P49768 AC093249.5-201ENST00000568120 430 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 RN7SL203P-201ENST00000579600 296 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC9.14□□□□□ -0.95
PSEN1P49768 AC233702.11-201ENST00000598588 333 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 AC090950.1-201ENST00000604625 830 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC9.14□□□□□ -0.95
PSEN1P49768 U2.1-201ENST00000618978 145 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 AC093909.6-201ENST00000624757 775 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 LINC01206-219ENST00000625703 820 ntTSL 5 BASIC9.14□□□□□ -0.95
PSEN1P49768 ANAPC1-210ENST00000628342 450 ntTSL 5 BASIC9.14□□□□□ -0.95
PSEN1P49768 ABCA17P-204ENST00000494925 3478 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PSEN1P49768 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PSEN1P49768 AC105074.1-201ENST00000623380 3095 ntBASIC9.14□□□□□ -0.95
PSEN1P49768 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
PSEN1P49768 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
PSEN1P49768 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC9.14□□□□□ -0.95
PSEN1P49768 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
PSEN1P49768 CD36-209ENST00000435819 2365 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
PSEN1P49768 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PSEN1P49768 OLFM5P-201ENST00000411807 1478 ntBASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms