Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SNORA70.9-201ENST00000384370 135 ntBASIC7.18□□□□□ -1.26
COL15A1P39059 SNORA81-201ENST00000408493 178 ntBASIC7.18□□□□□ -1.26
COL15A1P39059 RN7SKP213-201ENST00000410746 298 ntBASIC7.18□□□□□ -1.26
COL15A1P39059 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC7.18□□□□□ -1.26
COL15A1P39059 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC7.18□□□□□ -1.26
COL15A1P39059 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 AC078899.1-201ENST00000521432 1185 ntBASIC7.18□□□□□ -1.26
COL15A1P39059 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.18□□□□□ -1.26
COL15A1P39059 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.18□□□□□ -1.26
COL15A1P39059 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.18□□□□□ -1.26
COL15A1P39059 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC7.18□□□□□ -1.26
COL15A1P39059 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.18□□□□□ -1.26
COL15A1P39059 AP002884.5-201ENST00000595053 1132 ntBASIC7.18□□□□□ -1.26
COL15A1P39059 AC126915.2-201ENST00000610957 190 ntBASIC7.18□□□□□ -1.26
COL15A1P39059 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.18□□□□□ -1.26
COL15A1P39059 AC243960.7-201ENST00000623532 707 ntBASIC7.18□□□□□ -1.26
COL15A1P39059 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
COL15A1P39059 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.18□□□□□ -1.26
COL15A1P39059 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
COL15A1P39059 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL15A1P39059 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL15A1P39059 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL15A1P39059 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL15A1P39059 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL15A1P39059 AC022164.1-201ENST00000568767 2673 ntBASIC7.17□□□□□ -1.26
COL15A1P39059 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL15A1P39059 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.17□□□□□ -1.26
COL15A1P39059 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
COL15A1P39059 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL15A1P39059 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL15A1P39059 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.17□□□□□ -1.26
COL15A1P39059 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL15A1P39059 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
COL15A1P39059 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL15A1P39059 AP001157.1-201ENST00000550837 2339 ntBASIC7.17□□□□□ -1.26
COL15A1P39059 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL15A1P39059 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL15A1P39059 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.17□□□□□ -1.26
COL15A1P39059 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
COL15A1P39059 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL15A1P39059 AC005294.1-201ENST00000355509 281 ntBASIC7.17□□□□□ -1.26
COL15A1P39059 RNA5SP335-201ENST00000363817 110 ntBASIC7.17□□□□□ -1.26
COL15A1P39059 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL15A1P39059 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.17□□□□□ -1.26
COL15A1P39059 RNA5SP339-201ENST00000390987 122 ntBASIC7.17□□□□□ -1.26
COL15A1P39059 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.17□□□□□ -1.26
COL15A1P39059 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.17□□□□□ -1.26
COL15A1P39059 AC005033.1-201ENST00000428904 813 ntBASIC7.17□□□□□ -1.26
COL15A1P39059 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC7.17□□□□□ -1.26
COL15A1P39059 KRT8P51-201ENST00000438938 274 ntBASIC7.17□□□□□ -1.26
COL15A1P39059 AC017099.1-201ENST00000448261 1028 ntBASIC7.17□□□□□ -1.26
COL15A1P39059 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.17□□□□□ -1.26
COL15A1P39059 RSU1P1-201ENST00000453416 441 ntBASIC7.17□□□□□ -1.26
COL15A1P39059 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.17□□□□□ -1.26
COL15A1P39059 OR52A4P-202ENST00000481634 799 ntBASIC7.17□□□□□ -1.26
COL15A1P39059 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
COL15A1P39059 AC147055.3-201ENST00000510547 851 ntBASIC7.17□□□□□ -1.26
COL15A1P39059 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.17□□□□□ -1.26
COL15A1P39059 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.17□□□□□ -1.26
COL15A1P39059 DPPA3P2-202ENST00000557188 1219 ntBASIC7.17□□□□□ -1.26
COL15A1P39059 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC7.17□□□□□ -1.26
COL15A1P39059 TMF1P1-201ENST00000576058 373 ntBASIC7.17□□□□□ -1.26
COL15A1P39059 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.17□□□□□ -1.26
COL15A1P39059 AL354696.1-201ENST00000614652 497 ntBASIC7.17□□□□□ -1.26
COL15A1P39059 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL15A1P39059 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL15A1P39059 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.17□□□□□ -1.26
COL15A1P39059 AP004607.3-201ENST00000530354 3915 ntBASIC7.17□□□□□ -1.26
COL15A1P39059 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL15A1P39059 OFD1P17-201ENST00000437639 3018 ntBASIC7.16□□□□□ -1.26
COL15A1P39059 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
COL15A1P39059 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL15A1P39059 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL15A1P39059 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.16□□□□□ -1.26
COL15A1P39059 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
COL15A1P39059 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.16□□□□□ -1.26
COL15A1P39059 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL15A1P39059 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
COL15A1P39059 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL15A1P39059 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.16□□□□□ -1.26
COL15A1P39059 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
COL15A1P39059 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
COL15A1P39059 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC7.16□□□□□ -1.26
COL15A1P39059 RNU4-2-201ENST00000365668 141 ntBASIC7.16□□□□□ -1.26
COL15A1P39059 AL451142.1-201ENST00000375867 775 ntBASIC7.16□□□□□ -1.26
COL15A1P39059 AL133270.1-201ENST00000402635 279 ntBASIC7.16□□□□□ -1.26
COL15A1P39059 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.16□□□□□ -1.26
COL15A1P39059 LDHAP2-201ENST00000437325 985 ntBASIC7.16□□□□□ -1.26
COL15A1P39059 AL035090.1-201ENST00000454835 332 ntBASIC7.16□□□□□ -1.26
COL15A1P39059 AL049829.1-201ENST00000465411 156 ntBASIC7.16□□□□□ -1.26
COL15A1P39059 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.16□□□□□ -1.26
COL15A1P39059 AC147055.1-201ENST00000509261 750 ntBASIC7.16□□□□□ -1.26
COL15A1P39059 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC7.16□□□□□ -1.26
COL15A1P39059 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC7.16□□□□□ -1.26
COL15A1P39059 AC016911.1-201ENST00000613297 452 ntBASIC7.16□□□□□ -1.26
COL15A1P39059 AC025574.2-201ENST00000615621 514 ntBASIC7.16□□□□□ -1.26
COL15A1P39059 AC090510.2-201ENST00000617465 629 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms