Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD13P35453 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD13P35453 AC073109.1-201ENST00000445066 978 ntBASIC6.24□□□□□ -1.41
HOXD13P35453 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD13P35453 RAB28P3-201ENST00000448325 597 ntBASIC6.24□□□□□ -1.41
HOXD13P35453 AC084754.1-201ENST00000463466 464 ntBASIC6.24□□□□□ -1.41
HOXD13P35453 RPS3AP15-201ENST00000483874 781 ntBASIC6.24□□□□□ -1.41
HOXD13P35453 PSMA2P2-201ENST00000504319 686 ntBASIC6.24□□□□□ -1.41
HOXD13P35453 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXD13P35453 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD13P35453 DUTP7-201ENST00000507982 486 ntBASIC6.24□□□□□ -1.41
HOXD13P35453 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD13P35453 GAPDHP62-201ENST00000515313 990 ntBASIC6.24□□□□□ -1.41
HOXD13P35453 RN7SKP253-201ENST00000516424 309 ntBASIC6.24□□□□□ -1.41
HOXD13P35453 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD13P35453 SEC11B-201ENST00000518383 499 ntBASIC6.24□□□□□ -1.41
HOXD13P35453 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.24□□□□□ -1.41
HOXD13P35453 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD13P35453 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXD13P35453 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD13P35453 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD13P35453 AGGF1P7-201ENST00000562369 913 ntBASIC6.24□□□□□ -1.41
HOXD13P35453 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HOXD13P35453 AC027281.1-201ENST00000574178 758 ntBASIC6.24□□□□□ -1.41
HOXD13P35453 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD13P35453 MIR4260-201ENST00000583107 67 ntBASIC6.24□□□□□ -1.41
HOXD13P35453 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD13P35453 AC005229.3-201ENST00000603438 323 ntBASIC6.24□□□□□ -1.41
HOXD13P35453 AL133406.3-201ENST00000606817 541 ntBASIC6.24□□□□□ -1.41
HOXD13P35453 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD13P35453 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD13P35453 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXD13P35453 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD13P35453 AP001153.1-201ENST00000641024 338 ntBASIC6.24□□□□□ -1.41
HOXD13P35453 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD13P35453 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD13P35453 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
HOXD13P35453 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD13P35453 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD13P35453 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD13P35453 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD13P35453 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD13P35453 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD13P35453 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD13P35453 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD13P35453 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD13P35453 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HOXD13P35453 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXD13P35453 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD13P35453 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD13P35453 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HOXD13P35453 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXD13P35453 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXD13P35453 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD13P35453 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD13P35453 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
HOXD13P35453 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
HOXD13P35453 PWAR1-201ENST00000624188 2414 ntBASIC6.23□□□□□ -1.41
HOXD13P35453 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HOXD13P35453 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD13P35453 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD13P35453 RNU6-670P-201ENST00000364312 104 ntBASIC6.23□□□□□ -1.41
HOXD13P35453 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXD13P35453 AC093155.2-201ENST00000420734 937 ntBASIC6.23□□□□□ -1.41
HOXD13P35453 RNGTTP1-201ENST00000420965 728 ntBASIC6.23□□□□□ -1.41
HOXD13P35453 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXD13P35453 MTCO1P51-201ENST00000427672 1060 ntBASIC6.23□□□□□ -1.41
HOXD13P35453 AL022331.1-201ENST00000429025 477 ntBASIC6.23□□□□□ -1.41
HOXD13P35453 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXD13P35453 AL161722.1-201ENST00000446972 1032 ntBASIC6.23□□□□□ -1.41
HOXD13P35453 RPS23P2-201ENST00000463671 415 ntBASIC6.23□□□□□ -1.41
HOXD13P35453 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
HOXD13P35453 RPL12P24-201ENST00000474907 486 ntBASIC6.23□□□□□ -1.41
HOXD13P35453 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.23□□□□□ -1.41
HOXD13P35453 SNORA70.20-201ENST00000516848 126 ntBASIC6.23□□□□□ -1.41
HOXD13P35453 HMGB1P42-201ENST00000532126 553 ntBASIC6.23□□□□□ -1.41
HOXD13P35453 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXD13P35453 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.23□□□□□ -1.41
HOXD13P35453 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD13P35453 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXD13P35453 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD13P35453 AC015712.7-201ENST00000615211 635 ntBASIC6.23□□□□□ -1.41
HOXD13P35453 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.23□□□□□ -1.41
HOXD13P35453 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD13P35453 SRRM1P3-201ENST00000426911 2678 ntBASIC6.23□□□□□ -1.41
HOXD13P35453 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD13P35453 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD13P35453 AC004076.2-201ENST00000620532 3323 ntBASIC6.23□□□□□ -1.41
HOXD13P35453 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
HOXD13P35453 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD13P35453 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXD13P35453 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXD13P35453 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXD13P35453 AC018809.2-201ENST00000602436 3823 ntBASIC6.22□□□□□ -1.41
HOXD13P35453 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXD13P35453 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXD13P35453 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXD13P35453 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HOXD13P35453 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXD13P35453 MIR375-201ENST00000362103 64 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms