Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CTNNA1P35221 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.07□□□□□ -1.44
CTNNA1P35221 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CTNNA1P35221 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.07□□□□□ -1.44
CTNNA1P35221 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA1P35221 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
CTNNA1P35221 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA1P35221 AL356317.1-201ENST00000396110 1436 ntBASIC6.07□□□□□ -1.44
CTNNA1P35221 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
CTNNA1P35221 AP001029.2-203ENST00000589795 4910 ntBASIC6.07□□□□□ -1.44
CTNNA1P35221 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
CTNNA1P35221 AC117409.1-201ENST00000470499 1310 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.06□□□□□ -1.44
CTNNA1P35221 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA1P35221 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.06□□□□□ -1.44
CTNNA1P35221 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA1P35221 RN7SKP145-201ENST00000363291 303 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 SNORA51.9-201ENST00000384295 124 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CTNNA1P35221 AC002524.1-201ENST00000411687 547 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 DSTNP5-201ENST00000427921 523 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.06□□□□□ -1.44
CTNNA1P35221 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.06□□□□□ -1.44
CTNNA1P35221 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.06□□□□□ -1.44
CTNNA1P35221 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.06□□□□□ -1.44
CTNNA1P35221 AC005077.1-201ENST00000449226 375 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.06□□□□□ -1.44
CTNNA1P35221 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA1P35221 RN7SL568P-201ENST00000493069 298 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 IGKV3D-25-201ENST00000519599 235 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.06□□□□□ -1.44
CTNNA1P35221 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.06□□□□□ -1.44
CTNNA1P35221 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.06□□□□□ -1.44
CTNNA1P35221 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.06□□□□□ -1.44
CTNNA1P35221 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.06□□□□□ -1.44
CTNNA1P35221 AC018552.1-201ENST00000562099 811 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.06□□□□□ -1.44
CTNNA1P35221 AC027216.1-201ENST00000577726 685 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 FAM106CP-201ENST00000582212 507 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 AC005244.1-201ENST00000582566 339 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.06□□□□□ -1.44
CTNNA1P35221 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA1P35221 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.06□□□□□ -1.44
CTNNA1P35221 AL022394.1-201ENST00000606979 292 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 AL592494.3-201ENST00000609485 464 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 Z95327.3-201ENST00000610385 572 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.06□□□□□ -1.44
CTNNA1P35221 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.06□□□□□ -1.44
CTNNA1P35221 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC6.06□□□□□ -1.44
CTNNA1P35221 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.06□□□□□ -1.44
CTNNA1P35221 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CTNNA1P35221 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
CTNNA1P35221 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.06□□□□□ -1.44
CTNNA1P35221 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA1P35221 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA1P35221 RBPJP2-201ENST00000618187 1444 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.06□□□□□ -1.44
CTNNA1P35221 HSPD1P9-201ENST00000420325 1636 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.06□□□□□ -1.44
CTNNA1P35221 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA1P35221 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA1P35221 AL354854.1-201ENST00000455940 1363 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.06□□□□□ -1.44
CTNNA1P35221 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.06□□□□□ -1.44
CTNNA1P35221 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CTNNA1P35221 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA1P35221 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA1P35221 QRSL1P1-201ENST00000400977 1540 ntBASIC6.05□□□□□ -1.44
CTNNA1P35221 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA1P35221 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA1P35221 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CTNNA1P35221 AL022311.1-201ENST00000623726 19416 ntBASIC6.05□□□□□ -1.44
CTNNA1P35221 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.05□□□□□ -1.44
CTNNA1P35221 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CTNNA1P35221 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA1P35221 MIR191-201ENST00000384873 92 ntBASIC6.05□□□□□ -1.44
CTNNA1P35221 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA1P35221 DEFA9P-201ENST00000433042 285 ntBASIC6.05□□□□□ -1.44
CTNNA1P35221 RPL5P7-201ENST00000444235 813 ntBASIC6.05□□□□□ -1.44
CTNNA1P35221 KF459542.1-201ENST00000450908 553 ntBASIC6.05□□□□□ -1.44
CTNNA1P35221 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA1P35221 AC091917.2-201ENST00000505002 744 ntBASIC6.05□□□□□ -1.44
CTNNA1P35221 AC112484.3-201ENST00000505910 329 ntBASIC6.05□□□□□ -1.44
CTNNA1P35221 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.05□□□□□ -1.44
CTNNA1P35221 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.05□□□□□ -1.44
CTNNA1P35221 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA1P35221 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.05□□□□□ -1.44
CTNNA1P35221 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.05□□□□□ -1.44
CTNNA1P35221 AC002519.2-203ENST00000567043 837 ntBASIC6.05□□□□□ -1.44
CTNNA1P35221 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.05□□□□□ -1.44
CTNNA1P35221 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CTNNA1P35221 AC009303.3-201ENST00000591103 736 ntBASIC6.05□□□□□ -1.44
CTNNA1P35221 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.05□□□□□ -1.44
CTNNA1P35221 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.05□□□□□ -1.44
CTNNA1P35221 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
CTNNA1P35221 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA1P35221 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
CTNNA1P35221 AP005435.3-201ENST00000531260 3198 ntBASIC6.05□□□□□ -1.44
CTNNA1P35221 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA1P35221 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms