Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SLC6A4P31645 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
SLC6A4P31645 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SLC6A4P31645 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.27□□□□□ -1.41
SLC6A4P31645 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.27□□□□□ -1.41
SLC6A4P31645 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
SLC6A4P31645 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SLC6A4P31645 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SLC6A4P31645 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SLC6A4P31645 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SLC6A4P31645 RNA5SP273-201ENST00000362484 113 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 RNA5SP477-201ENST00000362639 119 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 RNU105B-201ENST00000364478 208 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.27□□□□□ -1.41
SLC6A4P31645 LYPLA1P3-201ENST00000402650 695 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 SNORA11B-201ENST00000408175 129 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 RNU4-27P-201ENST00000410889 139 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 AL354890.1-201ENST00000413730 346 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 MTND4LP17-201ENST00000414607 293 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.27□□□□□ -1.41
SLC6A4P31645 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.27□□□□□ -1.41
SLC6A4P31645 TCEA1P2-201ENST00000420496 906 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 AC241520.1-201ENST00000422654 1099 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 AC007568.1-201ENST00000422912 471 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.27□□□□□ -1.41
SLC6A4P31645 AC007563.3-201ENST00000433233 371 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 AC092473.1-201ENST00000441098 221 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.27□□□□□ -1.41
SLC6A4P31645 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SLC6A4P31645 RPL7P55-201ENST00000450522 746 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 AC094085.1-201ENST00000468914 584 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 AC105918.1-201ENST00000474399 838 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 METTL15P1-201ENST00000481421 1045 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.27□□□□□ -1.41
SLC6A4P31645 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
SLC6A4P31645 AC008427.1-201ENST00000503102 655 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 OR5H7P-201ENST00000514084 930 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 RN7SKP287-201ENST00000516546 266 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.27□□□□□ -1.41
SLC6A4P31645 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.27□□□□□ -1.41
SLC6A4P31645 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.27□□□□□ -1.41
SLC6A4P31645 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SLC6A4P31645 AP004609.2-201ENST00000532177 190 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
SLC6A4P31645 LRRC34P1-201ENST00000542742 915 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 NANOGNBP2-201ENST00000544753 553 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 AC007956.1-201ENST00000555623 542 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.27□□□□□ -1.41
SLC6A4P31645 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.27□□□□□ -1.41
SLC6A4P31645 AF230666.2-201ENST00000602328 725 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SLC6A4P31645 MIR6809-201ENST00000612189 116 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 AC078880.5-201ENST00000617845 421 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.27□□□□□ -1.41
SLC6A4P31645 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.27□□□□□ -1.41
SLC6A4P31645 AC090617.9-201ENST00000623751 147 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 FRG1DP-201ENST00000635586 771 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SLC6A4P31645 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SLC6A4P31645 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.27□□□□□ -1.41
SLC6A4P31645 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.27□□□□□ -1.41
SLC6A4P31645 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SLC6A4P31645 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SLC6A4P31645 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SLC6A4P31645 CR382285.2-201ENST00000624662 1495 ntBASIC6.27□□□□□ -1.41
SLC6A4P31645 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SLC6A4P31645 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
SLC6A4P31645 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.26□□□□□ -1.41
SLC6A4P31645 CDY11P-201ENST00000447168 1651 ntBASIC6.26□□□□□ -1.41
SLC6A4P31645 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SLC6A4P31645 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SLC6A4P31645 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SLC6A4P31645 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SLC6A4P31645 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SLC6A4P31645 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.26□□□□□ -1.41
SLC6A4P31645 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
SLC6A4P31645 AL669831.5-218ENST00000591702 1873 ntBASIC6.26□□□□□ -1.41
SLC6A4P31645 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.26□□□□□ -1.41
SLC6A4P31645 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SLC6A4P31645 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
SLC6A4P31645 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SLC6A4P31645 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SLC6A4P31645 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SLC6A4P31645 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SLC6A4P31645 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.26□□□□□ -1.41
SLC6A4P31645 SNORD8-201ENST00000363915 110 ntBASIC6.26□□□□□ -1.41
SLC6A4P31645 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SLC6A4P31645 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SLC6A4P31645 HMGB3P19-201ENST00000403971 560 ntBASIC6.26□□□□□ -1.41
SLC6A4P31645 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.26□□□□□ -1.41
SLC6A4P31645 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.26□□□□□ -1.41
SLC6A4P31645 BX664727.1-201ENST00000416024 466 ntBASIC6.26□□□□□ -1.41
SLC6A4P31645 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SLC6A4P31645 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.26□□□□□ -1.41
SLC6A4P31645 RPL12P12-201ENST00000424633 501 ntBASIC6.26□□□□□ -1.41
SLC6A4P31645 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC6.26□□□□□ -1.41
SLC6A4P31645 ZNF736P7Y-201ENST00000425158 820 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms