Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXA9P31269 AP003080.1-202ENST00000526526 915 ntBASIC5.93□□□□□ -1.46
HOXA9P31269 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXA9P31269 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HOXA9P31269 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXA9P31269 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXA9P31269 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXA9P31269 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXA9P31269 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXA9P31269 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXA9P31269 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXA9P31269 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
HOXA9P31269 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXA9P31269 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXA9P31269 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXA9P31269 AP004607.3-201ENST00000530354 3915 ntBASIC5.93□□□□□ -1.46
HOXA9P31269 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA9P31269 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.92□□□□□ -1.46
HOXA9P31269 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA9P31269 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
HOXA9P31269 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXA9P31269 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXA9P31269 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA9P31269 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HOXA9P31269 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HOXA9P31269 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.92□□□□□ -1.46
HOXA9P31269 GABARAPL3-201ENST00000412799 354 ntBASIC5.92□□□□□ -1.46
HOXA9P31269 NPM1P22-201ENST00000427761 952 ntBASIC5.92□□□□□ -1.46
HOXA9P31269 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXA9P31269 EEF1B2P5-201ENST00000444820 548 ntBASIC5.92□□□□□ -1.46
HOXA9P31269 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXA9P31269 OSTCP1-201ENST00000455507 450 ntBASIC5.92□□□□□ -1.46
HOXA9P31269 AC079080.1-201ENST00000479841 822 ntBASIC5.92□□□□□ -1.46
HOXA9P31269 AC004815.1-201ENST00000484185 331 ntBASIC5.92□□□□□ -1.46
HOXA9P31269 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXA9P31269 MIR4311-201ENST00000580794 100 ntBASIC5.92□□□□□ -1.46
HOXA9P31269 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.92□□□□□ -1.46
HOXA9P31269 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXA9P31269 AC136428.4-201ENST00000634254 1155 ntBASIC5.92□□□□□ -1.46
HOXA9P31269 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA9P31269 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXA9P31269 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXA9P31269 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA9P31269 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA9P31269 AL442128.2-201ENST00000620246 1824 ntBASIC5.92□□□□□ -1.46
HOXA9P31269 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA9P31269 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXA9P31269 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA9P31269 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.92□□□□□ -1.46
HOXA9P31269 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HOXA9P31269 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA9P31269 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA9P31269 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA9P31269 MRRFP1-201ENST00000435941 1675 ntBASIC5.91□□□□□ -1.46
HOXA9P31269 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA9P31269 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXA9P31269 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA9P31269 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA9P31269 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
HOXA9P31269 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
HOXA9P31269 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HOXA9P31269 AC005294.1-201ENST00000355509 281 ntBASIC5.91□□□□□ -1.46
HOXA9P31269 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXA9P31269 MIR551A-201ENST00000385042 96 ntBASIC5.91□□□□□ -1.46
HOXA9P31269 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXA9P31269 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA9P31269 RPL7L1P9-201ENST00000431298 745 ntBASIC5.91□□□□□ -1.46
HOXA9P31269 OR6D1P-201ENST00000436165 939 ntBASIC5.91□□□□□ -1.46
HOXA9P31269 RN7SL447P-201ENST00000494711 245 ntBASIC5.91□□□□□ -1.46
HOXA9P31269 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.91□□□□□ -1.46
HOXA9P31269 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXA9P31269 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA9P31269 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXA9P31269 AC125494.2-201ENST00000602431 657 ntBASIC5.91□□□□□ -1.46
HOXA9P31269 AL118522.2-201ENST00000616045 615 ntBASIC5.91□□□□□ -1.46
HOXA9P31269 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA9P31269 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HOXA9P31269 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXA9P31269 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA9P31269 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA9P31269 AP000432.2-201ENST00000624164 2048 ntBASIC5.91□□□□□ -1.46
HOXA9P31269 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA9P31269 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
HOXA9P31269 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXA9P31269 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
HOXA9P31269 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
HOXA9P31269 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
HOXA9P31269 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXA9P31269 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXA9P31269 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXA9P31269 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXA9P31269 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
HOXA9P31269 SNORD1C-201ENST00000363315 78 ntBASIC5.9□□□□□ -1.46
HOXA9P31269 RNA5SP507-201ENST00000363603 121 ntBASIC5.9□□□□□ -1.46
HOXA9P31269 AL645927.1-201ENST00000396783 406 ntBASIC5.9□□□□□ -1.46
HOXA9P31269 RPL23AP17-201ENST00000401064 499 ntBASIC5.9□□□□□ -1.46
HOXA9P31269 AL121835.1-201ENST00000404250 354 ntBASIC5.9□□□□□ -1.46
HOXA9P31269 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.9□□□□□ -1.46
HOXA9P31269 RPS6P23-201ENST00000413224 722 ntBASIC5.9□□□□□ -1.46
HOXA9P31269 RPL23AP27-201ENST00000415161 451 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms