Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.47□□□□□ -1.37
COL4A5P29400 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A5P29400 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A5P29400 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.47□□□□□ -1.37
COL4A5P29400 AP003175.1-201ENST00000641383 6658 ntBASIC6.47□□□□□ -1.37
COL4A5P29400 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.47□□□□□ -1.37
COL4A5P29400 AC010132.2-201ENST00000295493 1043 ntBASIC6.47□□□□□ -1.37
COL4A5P29400 AC068538.1-201ENST00000376856 336 ntBASIC6.47□□□□□ -1.37
COL4A5P29400 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A5P29400 AL133482.1-201ENST00000415988 498 ntBASIC6.47□□□□□ -1.37
COL4A5P29400 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.47□□□□□ -1.37
COL4A5P29400 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.47□□□□□ -1.37
COL4A5P29400 AC073648.4-201ENST00000442655 781 ntBASIC6.47□□□□□ -1.37
COL4A5P29400 RSU1P1-201ENST00000453416 441 ntBASIC6.47□□□□□ -1.37
COL4A5P29400 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.47□□□□□ -1.37
COL4A5P29400 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A5P29400 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.47□□□□□ -1.37
COL4A5P29400 AC024451.1-201ENST00000508013 779 ntBASIC6.47□□□□□ -1.37
COL4A5P29400 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.47□□□□□ -1.37
COL4A5P29400 AL163952.1-202ENST00000569625 600 ntBASIC6.47□□□□□ -1.37
COL4A5P29400 AC005341.1-201ENST00000571086 708 ntBASIC6.47□□□□□ -1.37
COL4A5P29400 AC104687.2-201ENST00000604442 342 ntBASIC6.47□□□□□ -1.37
COL4A5P29400 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A5P29400 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A5P29400 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A5P29400 MTCO1P1-201ENST00000624263 1081 ntBASIC6.47□□□□□ -1.37
COL4A5P29400 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.47□□□□□ -1.37
COL4A5P29400 AC074101.1-201ENST00000637861 241 ntBASIC6.47□□□□□ -1.37
COL4A5P29400 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.47□□□□□ -1.37
COL4A5P29400 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A5P29400 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A5P29400 THAP12P4-201ENST00000528321 2266 ntBASIC6.47□□□□□ -1.37
COL4A5P29400 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A5P29400 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.47□□□□□ -1.37
COL4A5P29400 HSPD1P7-201ENST00000447985 1686 ntBASIC6.47□□□□□ -1.37
COL4A5P29400 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL4A5P29400 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL4A5P29400 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL4A5P29400 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL4A5P29400 MIR105-1-201ENST00000385222 81 ntBASIC6.46□□□□□ -1.37
COL4A5P29400 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL4A5P29400 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
COL4A5P29400 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL4A5P29400 GJA6P-201ENST00000415117 1042 ntBASIC6.46□□□□□ -1.37
COL4A5P29400 RPS17P17-201ENST00000419392 409 ntBASIC6.46□□□□□ -1.37
COL4A5P29400 DDX39BP1-205ENST00000422507 192 ntBASIC6.46□□□□□ -1.37
COL4A5P29400 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.46□□□□□ -1.37
COL4A5P29400 C4BPAP2-201ENST00000428434 478 ntBASIC6.46□□□□□ -1.37
COL4A5P29400 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.46□□□□□ -1.37
COL4A5P29400 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.46□□□□□ -1.37
COL4A5P29400 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.46□□□□□ -1.37
COL4A5P29400 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.46□□□□□ -1.37
COL4A5P29400 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.46□□□□□ -1.37
COL4A5P29400 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.46□□□□□ -1.37
COL4A5P29400 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
COL4A5P29400 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
COL4A5P29400 MIR4737-201ENST00000583979 81 ntBASIC6.46□□□□□ -1.37
COL4A5P29400 AC073575.2-201ENST00000614212 627 ntBASIC6.46□□□□□ -1.37
COL4A5P29400 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A5P29400 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
COL4A5P29400 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.46□□□□□ -1.38
COL4A5P29400 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A5P29400 AC092747.4-201ENST00000620519 1861 ntBASIC6.46□□□□□ -1.38
COL4A5P29400 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC6.46□□□□□ -1.38
COL4A5P29400 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A5P29400 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.46□□□□□ -1.38
COL4A5P29400 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A5P29400 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.46□□□□□ -1.38
COL4A5P29400 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A5P29400 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.46□□□□□ -1.38
COL4A5P29400 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
COL4A5P29400 UG0898H09-202ENST00000623646 7040 ntBASIC6.46□□□□□ -1.38
COL4A5P29400 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.46□□□□□ -1.38
COL4A5P29400 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL4A5P29400 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.45□□□□□ -1.38
COL4A5P29400 AL365220.1-201ENST00000432923 399 ntBASIC6.45□□□□□ -1.38
COL4A5P29400 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL4A5P29400 AC008033.2-201ENST00000542626 177 ntBASIC6.45□□□□□ -1.38
COL4A5P29400 AL023583.1-201ENST00000607518 1143 ntBASIC6.45□□□□□ -1.38
COL4A5P29400 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.45□□□□□ -1.38
COL4A5P29400 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.45□□□□□ -1.38
COL4A5P29400 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.45□□□□□ -1.38
COL4A5P29400 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
COL4A5P29400 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
COL4A5P29400 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
COL4A5P29400 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL4A5P29400 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
COL4A5P29400 AL356967.1-201ENST00000406305 431 ntBASIC6.45□□□□□ -1.38
COL4A5P29400 CRIP1P1-201ENST00000427567 185 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms