Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL512593.1-201ENST00000444758 779 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.64□□□□□ -1.51
ABCD3P28288 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.64□□□□□ -1.51
ABCD3P28288 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.64□□□□□ -1.51
ABCD3P28288 RPL7L1P3-201ENST00000455249 689 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 AC009963.3-201ENST00000458090 486 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.64□□□□□ -1.51
ABCD3P28288 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.64□□□□□ -1.51
ABCD3P28288 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.64□□□□□ -1.51
ABCD3P28288 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.64□□□□□ -1.51
ABCD3P28288 NPM1P29-201ENST00000483112 803 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.64□□□□□ -1.51
ABCD3P28288 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.64□□□□□ -1.51
ABCD3P28288 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.64□□□□□ -1.51
ABCD3P28288 RN7SKP35-201ENST00000517210 151 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.64□□□□□ -1.51
ABCD3P28288 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.64□□□□□ -1.51
ABCD3P28288 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.64□□□□□ -1.51
ABCD3P28288 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.64□□□□□ -1.51
ABCD3P28288 AC073137.1-201ENST00000605636 634 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.64□□□□□ -1.51
ABCD3P28288 AP001033.2-201ENST00000609701 1003 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 RN7SL261P-201ENST00000613441 282 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 AL163051.2-201ENST00000618976 735 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.64□□□□□ -1.51
ABCD3P28288 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.64□□□□□ -1.51
ABCD3P28288 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.64□□□□□ -1.51
ABCD3P28288 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
ABCD3P28288 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.64□□□□□ -1.51
ABCD3P28288 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
ABCD3P28288 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
ABCD3P28288 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
ABCD3P28288 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.64□□□□□ -1.51
ABCD3P28288 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 MTCO1P15-201ENST00000529569 1526 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ABCD3P28288 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ABCD3P28288 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
ABCD3P28288 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.63□□□□□ -1.51
ABCD3P28288 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ABCD3P28288 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
ABCD3P28288 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ABCD3P28288 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ABCD3P28288 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ABCD3P28288 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ABCD3P28288 RNA5SP375-201ENST00000362975 119 ntBASIC5.63□□□□□ -1.51
ABCD3P28288 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ABCD3P28288 SNORA51.9-201ENST00000384295 124 ntBASIC5.63□□□□□ -1.51
ABCD3P28288 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ABCD3P28288 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ABCD3P28288 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.63□□□□□ -1.51
ABCD3P28288 AL034374.1-201ENST00000406329 351 ntBASIC5.63□□□□□ -1.51
ABCD3P28288 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.63□□□□□ -1.51
ABCD3P28288 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ABCD3P28288 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.63□□□□□ -1.51
ABCD3P28288 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.63□□□□□ -1.51
ABCD3P28288 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.63□□□□□ -1.51
ABCD3P28288 ZNF619P1-201ENST00000446539 752 ntBASIC5.63□□□□□ -1.51
ABCD3P28288 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.63□□□□□ -1.51
ABCD3P28288 AC012123.2-201ENST00000485809 248 ntBASIC5.63□□□□□ -1.51
ABCD3P28288 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.63□□□□□ -1.51
ABCD3P28288 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.63□□□□□ -1.51
ABCD3P28288 PRMT5P1-201ENST00000514351 598 ntBASIC5.63□□□□□ -1.51
ABCD3P28288 AC112206.4-201ENST00000515142 405 ntBASIC5.63□□□□□ -1.51
ABCD3P28288 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.63□□□□□ -1.51
ABCD3P28288 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.63□□□□□ -1.51
ABCD3P28288 AC113192.3-201ENST00000529152 742 ntBASIC5.63□□□□□ -1.51
ABCD3P28288 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
ABCD3P28288 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.63□□□□□ -1.51
ABCD3P28288 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.63□□□□□ -1.51
ABCD3P28288 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.63□□□□□ -1.51
ABCD3P28288 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.63□□□□□ -1.51
ABCD3P28288 AC025918.2-201ENST00000558683 763 ntBASIC5.63□□□□□ -1.51
ABCD3P28288 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
ABCD3P28288 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.63□□□□□ -1.51
ABCD3P28288 BNIP3P19-201ENST00000605397 577 ntBASIC5.63□□□□□ -1.51
ABCD3P28288 AC120053.1-201ENST00000607706 736 ntBASIC5.63□□□□□ -1.51
ABCD3P28288 AP001437.1-201ENST00000608783 456 ntBASIC5.63□□□□□ -1.51
ABCD3P28288 AC004801.6-201ENST00000616571 978 ntBASIC5.63□□□□□ -1.51
ABCD3P28288 AC253576.2-201ENST00000618815 580 ntBASIC5.63□□□□□ -1.51
ABCD3P28288 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.63□□□□□ -1.51
ABCD3P28288 FRG1DP-201ENST00000635586 771 ntBASIC5.63□□□□□ -1.51
ABCD3P28288 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ABCD3P28288 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.63□□□□□ -1.51
ABCD3P28288 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ABCD3P28288 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
ABCD3P28288 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ABCD3P28288 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ABCD3P28288 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
ABCD3P28288 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 751.4 ms