Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PWAR1-201ENST00000624188 2414 ntBASIC4.75□□□□□ -1.65
COL8A2P25067 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
COL8A2P25067 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
COL8A2P25067 CR788268.1-201ENST00000603931 1809 ntBASIC4.75□□□□□ -1.65
COL8A2P25067 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A2P25067 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A2P25067 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A2P25067 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
COL8A2P25067 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
COL8A2P25067 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.75□□□□□ -1.65
COL8A2P25067 RN7SKP28-201ENST00000364770 305 ntBASIC4.75□□□□□ -1.65
COL8A2P25067 RN7SKP59-201ENST00000410520 314 ntBASIC4.75□□□□□ -1.65
COL8A2P25067 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.75□□□□□ -1.65
COL8A2P25067 NPM1P4-201ENST00000414095 812 ntBASIC4.75□□□□□ -1.65
COL8A2P25067 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.75□□□□□ -1.65
COL8A2P25067 BX510359.3-201ENST00000422168 306 ntBASIC4.75□□□□□ -1.65
COL8A2P25067 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.75□□□□□ -1.65
COL8A2P25067 AC006335.2-201ENST00000437993 330 ntBASIC4.75□□□□□ -1.65
COL8A2P25067 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.75□□□□□ -1.65
COL8A2P25067 NPM1P19-201ENST00000450070 712 ntBASIC4.75□□□□□ -1.65
COL8A2P25067 AL133445.1-201ENST00000467051 452 ntBASIC4.75□□□□□ -1.65
COL8A2P25067 RN7SL547P-201ENST00000490793 290 ntBASIC4.75□□□□□ -1.65
COL8A2P25067 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.75□□□□□ -1.65
COL8A2P25067 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.75□□□□□ -1.65
COL8A2P25067 BX510359.5-201ENST00000515651 304 ntBASIC4.75□□□□□ -1.65
COL8A2P25067 IGLV3-24-201ENST00000517477 197 ntBASIC4.75□□□□□ -1.65
COL8A2P25067 NRBF2P4-201ENST00000520874 850 ntBASIC4.75□□□□□ -1.65
COL8A2P25067 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.75□□□□□ -1.65
COL8A2P25067 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.75□□□□□ -1.65
COL8A2P25067 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.75□□□□□ -1.65
COL8A2P25067 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.75□□□□□ -1.65
COL8A2P25067 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.75□□□□□ -1.65
COL8A2P25067 AC010245.2-201ENST00000606908 1167 ntBASIC4.75□□□□□ -1.65
COL8A2P25067 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
COL8A2P25067 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.75□□□□□ -1.65
COL8A2P25067 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A2P25067 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A2P25067 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A2P25067 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A2P25067 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.75□□□□□ -1.65
COL8A2P25067 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.75□□□□□ -1.65
COL8A2P25067 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.75□□□□□ -1.65
COL8A2P25067 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.75□□□□□ -1.65
COL8A2P25067 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A2P25067 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A2P25067 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.75□□□□□ -1.65
COL8A2P25067 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC4.75□□□□□ -1.65
COL8A2P25067 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A2P25067 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A2P25067 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
COL8A2P25067 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
COL8A2P25067 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.74□□□□□ -1.65
COL8A2P25067 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A2P25067 KYNUP3-201ENST00000574386 1341 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A2P25067 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
COL8A2P25067 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.74□□□□□ -1.65
COL8A2P25067 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A2P25067 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A2P25067 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A2P25067 U3.10-201ENST00000364459 214 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 RNU4-2-201ENST00000365668 141 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 RNU11-201ENST00000387069 134 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 RNA5SP91-201ENST00000390902 119 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A2P25067 AL121977.1-201ENST00000401636 979 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 MIR1178-201ENST00000408396 91 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A2P25067 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.74□□□□□ -1.65
COL8A2P25067 GABARAPL3-201ENST00000412799 354 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A2P25067 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.74□□□□□ -1.65
COL8A2P25067 VN1R21P-201ENST00000426703 765 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.74□□□□□ -1.65
COL8A2P25067 CFL1P1-202ENST00000432948 411 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.74□□□□□ -1.65
COL8A2P25067 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A2P25067 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.74□□□□□ -1.65
COL8A2P25067 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.74□□□□□ -1.65
COL8A2P25067 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
COL8A2P25067 RSU1P1-201ENST00000453416 441 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 AC007386.1-201ENST00000455212 582 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.74□□□□□ -1.65
COL8A2P25067 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.74□□□□□ -1.65
COL8A2P25067 AC125612.1-201ENST00000547580 377 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A2P25067 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.74□□□□□ -1.65
COL8A2P25067 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.74□□□□□ -1.65
COL8A2P25067 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.74□□□□□ -1.65
COL8A2P25067 NPM1P45-201ENST00000583151 559 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 AP001357.1-201ENST00000586304 1053 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.74□□□□□ -1.65
COL8A2P25067 AL360012.1-201ENST00000602813 131 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 AL583832.1-201ENST00000603227 784 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 AC005840.5-201ENST00000619166 599 ntBASIC4.74□□□□□ -1.65
COL8A2P25067 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
COL8A2P25067 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
COL8A2P25067 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
COL8A2P25067 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.74□□□□□ -1.65
COL8A2P25067 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms