Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.65□□□□□ -1.51
TNFSF4P23510 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TNFSF4P23510 RNF6P1-201ENST00000444889 1784 ntBASIC5.65□□□□□ -1.51
TNFSF4P23510 RACGAP1P-201ENST00000550663 1879 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.64□□□□□ -1.51
TNFSF4P23510 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFSF4P23510 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.64□□□□□ -1.51
TNFSF4P23510 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 AL136531.3-201ENST00000624378 3658 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
TNFSF4P23510 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.64□□□□□ -1.51
TNFSF4P23510 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFSF4P23510 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
TNFSF4P23510 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.64□□□□□ -1.51
TNFSF4P23510 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TNFSF4P23510 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TNFSF4P23510 RNA5SP140-201ENST00000364524 92 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TNFSF4P23510 RNU6-317P-201ENST00000384031 107 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 RNU6-549P-201ENST00000384433 107 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 AC245036.1-201ENST00000391727 309 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.64□□□□□ -1.51
TNFSF4P23510 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFSF4P23510 MTATP6P20-201ENST00000414147 562 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 AL713922.1-201ENST00000416477 747 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFSF4P23510 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 NPM1P22-201ENST00000427761 952 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFSF4P23510 AL022324.2-201ENST00000434827 780 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 PA2G4P1-201ENST00000442248 1197 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TNFSF4P23510 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFSF4P23510 RPS3AP49-201ENST00000472161 790 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 AC020898.1-201ENST00000474167 787 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 TRBV8-2-201ENST00000475637 270 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFSF4P23510 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFSF4P23510 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.64□□□□□ -1.51
TNFSF4P23510 AC108103.1-201ENST00000511286 446 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFSF4P23510 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFSF4P23510 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.64□□□□□ -1.51
TNFSF4P23510 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFSF4P23510 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFSF4P23510 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFSF4P23510 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.64□□□□□ -1.51
TNFSF4P23510 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 AP003115.1-201ENST00000569849 463 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 RN7SL208P-201ENST00000577964 296 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 SYPL1P2-201ENST00000582878 727 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.64□□□□□ -1.51
TNFSF4P23510 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFSF4P23510 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFSF4P23510 LSM1P2-201ENST00000604911 322 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 AC004890.3-201ENST00000605566 1095 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 AC013244.3-201ENST00000605614 388 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 U1.41-201ENST00000617626 165 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 AL138693.1-201ENST00000622219 129 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFSF4P23510 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFSF4P23510 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 AC097063.1-201ENST00000426714 1797 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFSF4P23510 CLCA3P-203ENST00000490028 2781 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
TNFSF4P23510 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.64□□□□□ -1.51
TNFSF4P23510 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 DOCK11P1-201ENST00000553480 5932 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 CASC19-260ENST00000641828 2001 ntBASIC5.64□□□□□ -1.51
TNFSF4P23510 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TNFSF4P23510 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF4P23510 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.63□□□□□ -1.51
TNFSF4P23510 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF4P23510 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF4P23510 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF4P23510 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF4P23510 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.63□□□□□ -1.51
TNFSF4P23510 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF4P23510 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF4P23510 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
TNFSF4P23510 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF4P23510 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF4P23510 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFSF4P23510 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TNFSF4P23510 ANKRD36P1-201ENST00000344424 659 ntBASIC5.63□□□□□ -1.51
TNFSF4P23510 RNA5SP308-201ENST00000362532 115 ntBASIC5.63□□□□□ -1.51
TNFSF4P23510 RNU6-1339P-201ENST00000363574 91 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms