Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL022331.1-201ENST00000429025 477 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.67□□□□□ -1.5
XRCC1P18887 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.67□□□□□ -1.5
XRCC1P18887 RPL36AP39-201ENST00000445859 318 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.67□□□□□ -1.5
XRCC1P18887 PPIAP20-201ENST00000449839 135 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.67□□□□□ -1.5
XRCC1P18887 RNU1-88P-201ENST00000459274 128 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 AL157777.1-201ENST00000468100 304 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.67□□□□□ -1.5
XRCC1P18887 RPL38P3-201ENST00000484463 213 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 RPSAP51-201ENST00000497462 645 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.67□□□□□ -1.5
XRCC1P18887 AC026782.2-201ENST00000510845 636 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.67□□□□□ -1.5
XRCC1P18887 MIR2117-201ENST00000516780 80 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.67□□□□□ -1.5
XRCC1P18887 AC112191.2-201ENST00000522428 333 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.67□□□□□ -1.5
XRCC1P18887 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.67□□□□□ -1.5
XRCC1P18887 AC010547.6-201ENST00000571789 193 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.67□□□□□ -1.5
XRCC1P18887 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.67□□□□□ -1.5
XRCC1P18887 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.67□□□□□ -1.5
XRCC1P18887 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.67□□□□□ -1.5
XRCC1P18887 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.67□□□□□ -1.5
XRCC1P18887 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
XRCC1P18887 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
XRCC1P18887 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
XRCC1P18887 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
XRCC1P18887 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
XRCC1P18887 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
XRCC1P18887 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
XRCC1P18887 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.66□□□□□ -1.5
XRCC1P18887 AC009962.1-201ENST00000567327 3813 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
XRCC1P18887 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
XRCC1P18887 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
XRCC1P18887 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
XRCC1P18887 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
XRCC1P18887 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
XRCC1P18887 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
XRCC1P18887 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
XRCC1P18887 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
XRCC1P18887 RN7SKP145-201ENST00000363291 303 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 RNA5SP394-201ENST00000364216 119 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.66□□□□□ -1.5
XRCC1P18887 RN7SKP279-201ENST00000411383 298 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 RN7SKP293-201ENST00000411389 296 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 AC127526.2-201ENST00000426436 775 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 CRIP1P1-201ENST00000427567 185 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 HMGB3P24-201ENST00000433260 622 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 SUMO2P3-201ENST00000438311 288 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
XRCC1P18887 AC023271.1-201ENST00000445936 1090 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
XRCC1P18887 AC090602.1-201ENST00000469695 252 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 RPSAP37-201ENST00000470913 821 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.66□□□□□ -1.5
XRCC1P18887 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.66□□□□□ -1.5
XRCC1P18887 RN7SL753P-201ENST00000581238 290 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.66□□□□□ -1.5
XRCC1P18887 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.66□□□□□ -1.5
XRCC1P18887 AL513327.3-201ENST00000602618 469 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 AL161912.3-201ENST00000605404 628 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 RNA5SP440-201ENST00000612665 119 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 RN7SL787P-201ENST00000613000 284 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
XRCC1P18887 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
XRCC1P18887 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
XRCC1P18887 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
XRCC1P18887 AP001284.1-201ENST00000528393 2118 ntBASIC5.66□□□□□ -1.5
XRCC1P18887 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
XRCC1P18887 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.66□□□□□ -1.5
XRCC1P18887 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.66□□□□□ -1.5
XRCC1P18887 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
XRCC1P18887 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.66□□□□□ -1.5
XRCC1P18887 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
XRCC1P18887 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
XRCC1P18887 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
XRCC1P18887 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.65□□□□□ -1.5
XRCC1P18887 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
XRCC1P18887 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.65□□□□□ -1.5
XRCC1P18887 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
XRCC1P18887 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
XRCC1P18887 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.65□□□□□ -1.5
XRCC1P18887 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
XRCC1P18887 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
XRCC1P18887 MIR323A-201ENST00000362199 86 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 HMGB1P20-201ENST00000402555 677 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.65□□□□□ -1.5
XRCC1P18887 RN7SKP286-201ENST00000410894 299 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 SMC4P1-201ENST00000414479 527 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.65□□□□□ -1.5
XRCC1P18887 VTI1BP4-201ENST00000427516 527 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 OR2AF1P-201ENST00000454899 889 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 RN7SL197P-201ENST00000466981 299 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 RN7SL174P-201ENST00000475578 289 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 RN7SL717P-201ENST00000478343 297 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 894.8 ms