Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
TOP1P11387 U3.25-201ENST00000391209 220 ntBASIC6.63□□□□□ -1.35
TOP1P11387 GAPDHP42-201ENST00000406848 981 ntBASIC6.63□□□□□ -1.35
TOP1P11387 NACAP7-201ENST00000407371 609 ntBASIC6.63□□□□□ -1.35
TOP1P11387 RPS6P23-201ENST00000413224 722 ntBASIC6.63□□□□□ -1.35
TOP1P11387 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.63□□□□□ -1.35
TOP1P11387 AC079355.1-201ENST00000421770 223 ntBASIC6.63□□□□□ -1.35
TOP1P11387 SETP9-201ENST00000423837 832 ntBASIC6.63□□□□□ -1.35
TOP1P11387 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.63□□□□□ -1.35
TOP1P11387 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.63□□□□□ -1.35
TOP1P11387 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TOP1P11387 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.63□□□□□ -1.35
TOP1P11387 REG1CP-206ENST00000447469 496 ntBASIC6.63□□□□□ -1.35
TOP1P11387 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.63□□□□□ -1.35
TOP1P11387 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.63□□□□□ -1.35
TOP1P11387 LDHBP3-201ENST00000514909 822 ntBASIC6.63□□□□□ -1.35
TOP1P11387 NRBF2P4-201ENST00000520874 850 ntBASIC6.63□□□□□ -1.35
TOP1P11387 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.63□□□□□ -1.35
TOP1P11387 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.63□□□□□ -1.35
TOP1P11387 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.63□□□□□ -1.35
TOP1P11387 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TOP1P11387 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
TOP1P11387 AGGF1P7-201ENST00000562369 913 ntBASIC6.63□□□□□ -1.35
TOP1P11387 AC023389.2-201ENST00000580031 955 ntBASIC6.63□□□□□ -1.35
TOP1P11387 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.63□□□□□ -1.35
TOP1P11387 AL035661.1-201ENST00000620459 1144 ntBASIC6.63□□□□□ -1.35
TOP1P11387 AC009120.7-201ENST00000623452 780 ntBASIC6.63□□□□□ -1.35
TOP1P11387 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
TOP1P11387 AL049767.1-202ENST00000637826 242 ntBASIC6.63□□□□□ -1.35
TOP1P11387 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TOP1P11387 CASC19-260ENST00000641828 2001 ntBASIC6.63□□□□□ -1.35
TOP1P11387 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
TOP1P11387 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TOP1P11387 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TOP1P11387 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.62□□□□□ -1.35
TOP1P11387 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOP1P11387 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
TOP1P11387 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOP1P11387 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOP1P11387 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.62□□□□□ -1.35
TOP1P11387 AL391422.1-201ENST00000402155 436 ntBASIC6.62□□□□□ -1.35
TOP1P11387 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
TOP1P11387 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.62□□□□□ -1.35
TOP1P11387 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.62□□□□□ -1.35
TOP1P11387 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.62□□□□□ -1.35
TOP1P11387 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.62□□□□□ -1.35
TOP1P11387 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.62□□□□□ -1.35
TOP1P11387 AC006335.2-201ENST00000437993 330 ntBASIC6.62□□□□□ -1.35
TOP1P11387 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.62□□□□□ -1.35
TOP1P11387 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.62□□□□□ -1.35
TOP1P11387 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TOP1P11387 LDHBP2-201ENST00000456969 1005 ntBASIC6.62□□□□□ -1.35
TOP1P11387 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.62□□□□□ -1.35
TOP1P11387 RPS7P6-201ENST00000485777 579 ntBASIC6.62□□□□□ -1.35
TOP1P11387 DUTP7-201ENST00000507982 486 ntBASIC6.62□□□□□ -1.35
TOP1P11387 RNA5SP362-201ENST00000516048 118 ntBASIC6.62□□□□□ -1.35
TOP1P11387 RBM22P12-201ENST00000567098 1255 ntBASIC6.62□□□□□ -1.35
TOP1P11387 HIRAP1-201ENST00000605318 787 ntBASIC6.62□□□□□ -1.35
TOP1P11387 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.62□□□□□ -1.35
TOP1P11387 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.62□□□□□ -1.35
TOP1P11387 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.62□□□□□ -1.35
TOP1P11387 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TOP1P11387 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOP1P11387 AL162456.1-201ENST00000634535 2006 ntBASIC6.62□□□□□ -1.35
TOP1P11387 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.62□□□□□ -1.35
TOP1P11387 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
TOP1P11387 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOP1P11387 AC012078.1-201ENST00000405035 1646 ntBASIC6.61□□□□□ -1.35
TOP1P11387 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TOP1P11387 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
TOP1P11387 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
TOP1P11387 AC140479.2-201ENST00000421567 3130 ntBASIC6.61□□□□□ -1.35
TOP1P11387 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.61□□□□□ -1.35
TOP1P11387 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TOP1P11387 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TOP1P11387 SNORA51.1-201ENST00000363243 140 ntBASIC6.61□□□□□ -1.35
TOP1P11387 RPL11P3-201ENST00000395256 523 ntBASIC6.61□□□□□ -1.35
TOP1P11387 METTL15P3-201ENST00000415522 1221 ntBASIC6.61□□□□□ -1.35
TOP1P11387 AL133173.1-201ENST00000423458 397 ntBASIC6.61□□□□□ -1.35
TOP1P11387 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TOP1P11387 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.61□□□□□ -1.35
TOP1P11387 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
TOP1P11387 AL450023.1-201ENST00000450868 751 ntBASIC6.61□□□□□ -1.35
TOP1P11387 AP000547.1-201ENST00000454360 617 ntBASIC6.61□□□□□ -1.35
TOP1P11387 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.61□□□□□ -1.35
TOP1P11387 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.61□□□□□ -1.35
TOP1P11387 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.61□□□□□ -1.35
TOP1P11387 AC011411.1-201ENST00000509592 876 ntBASIC6.61□□□□□ -1.35
TOP1P11387 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.61□□□□□ -1.35
TOP1P11387 IGLV3-24-201ENST00000517477 197 ntBASIC6.61□□□□□ -1.35
TOP1P11387 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.61□□□□□ -1.35
TOP1P11387 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.61□□□□□ -1.35
TOP1P11387 AC139697.1-201ENST00000548429 745 ntBASIC6.61□□□□□ -1.35
TOP1P11387 NPM1P5-201ENST00000557228 838 ntBASIC6.61□□□□□ -1.35
TOP1P11387 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.61□□□□□ -1.35
TOP1P11387 MIR6886-201ENST00000619864 61 ntBASIC6.61□□□□□ -1.35
TOP1P11387 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TOP1P11387 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TOP1P11387 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
TOP1P11387 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms