Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
UBE4BO95155 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
UBE4BO95155 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
UBE4BO95155 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
UBE4BO95155 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
UBE4BO95155 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
UBE4BO95155 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
UBE4BO95155 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
UBE4BO95155 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
UBE4BO95155 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.16□□□□□ -1.42
UBE4BO95155 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
UBE4BO95155 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.16□□□□□ -1.42
UBE4BO95155 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
UBE4BO95155 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
UBE4BO95155 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
UBE4BO95155 RNA5SP510-201ENST00000364697 99 ntBASIC6.16□□□□□ -1.42
UBE4BO95155 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.16□□□□□ -1.42
UBE4BO95155 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
UBE4BO95155 GAPDHP42-201ENST00000406848 981 ntBASIC6.16□□□□□ -1.42
UBE4BO95155 RMRPP5-201ENST00000411156 267 ntBASIC6.16□□□□□ -1.42
UBE4BO95155 AC005297.1-201ENST00000444765 862 ntBASIC6.16□□□□□ -1.42
UBE4BO95155 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
UBE4BO95155 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.16□□□□□ -1.42
UBE4BO95155 AC112184.1-201ENST00000505179 312 ntBASIC6.16□□□□□ -1.42
UBE4BO95155 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.16□□□□□ -1.42
UBE4BO95155 AC111000.6-201ENST00000514471 709 ntBASIC6.16□□□□□ -1.42
UBE4BO95155 CYCSP22-201ENST00000517555 339 ntBASIC6.16□□□□□ -1.42
UBE4BO95155 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.16□□□□□ -1.42
UBE4BO95155 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.16□□□□□ -1.42
UBE4BO95155 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.16□□□□□ -1.42
UBE4BO95155 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.16□□□□□ -1.42
UBE4BO95155 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
UBE4BO95155 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
UBE4BO95155 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.16□□□□□ -1.42
UBE4BO95155 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
UBE4BO95155 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.16□□□□□ -1.42
UBE4BO95155 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
UBE4BO95155 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
UBE4BO95155 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
UBE4BO95155 MRE11P1-201ENST00000464884 2127 ntBASIC6.15□□□□□ -1.42
UBE4BO95155 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
UBE4BO95155 AC027279.1-201ENST00000568885 4284 ntBASIC6.15□□□□□ -1.42
UBE4BO95155 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
UBE4BO95155 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
UBE4BO95155 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
UBE4BO95155 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.15□□□□□ -1.43
UBE4BO95155 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
UBE4BO95155 BMS1P17-202ENST00000416720 316 ntBASIC6.15□□□□□ -1.43
UBE4BO95155 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.15□□□□□ -1.43
UBE4BO95155 LYPLA1P1-201ENST00000434514 622 ntBASIC6.15□□□□□ -1.43
UBE4BO95155 RPL23AP19-201ENST00000436229 369 ntBASIC6.15□□□□□ -1.43
UBE4BO95155 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.15□□□□□ -1.43
UBE4BO95155 VN1R96P-201ENST00000446052 858 ntBASIC6.15□□□□□ -1.43
UBE4BO95155 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.15□□□□□ -1.43
UBE4BO95155 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.15□□□□□ -1.43
UBE4BO95155 AC007998.1-201ENST00000474156 672 ntBASIC6.15□□□□□ -1.43
UBE4BO95155 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.15□□□□□ -1.43
UBE4BO95155 NRBF2P4-201ENST00000520874 850 ntBASIC6.15□□□□□ -1.43
UBE4BO95155 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.15□□□□□ -1.43
UBE4BO95155 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.15□□□□□ -1.43
UBE4BO95155 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.15□□□□□ -1.43
UBE4BO95155 AP003072.5-201ENST00000623872 773 ntBASIC6.15□□□□□ -1.43
UBE4BO95155 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.15□□□□□ -1.43
UBE4BO95155 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.43
UBE4BO95155 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
UBE4BO95155 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
UBE4BO95155 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
UBE4BO95155 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.15□□□□□ -1.43
UBE4BO95155 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
UBE4BO95155 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
UBE4BO95155 MT-RNR2-201ENST00000387347 1559 ntBASIC6.15□□□□□ -1.43
UBE4BO95155 AC091305.2-201ENST00000624049 1576 ntBASIC6.15□□□□□ -1.43
UBE4BO95155 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
UBE4BO95155 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
UBE4BO95155 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
UBE4BO95155 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.14□□□□□ -1.43
UBE4BO95155 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
UBE4BO95155 SRRM1P3-201ENST00000426911 2678 ntBASIC6.14□□□□□ -1.43
UBE4BO95155 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
UBE4BO95155 RNA5SP46-201ENST00000362370 120 ntBASIC6.14□□□□□ -1.43
UBE4BO95155 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
UBE4BO95155 AL009179.1-201ENST00000406085 265 ntBASIC6.14□□□□□ -1.43
UBE4BO95155 OR2AT2P-201ENST00000413438 905 ntBASIC6.14□□□□□ -1.43
UBE4BO95155 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.14□□□□□ -1.43
UBE4BO95155 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.14□□□□□ -1.43
UBE4BO95155 AC007161.1-204ENST00000423039 460 ntBASIC6.14□□□□□ -1.43
UBE4BO95155 AC138761.5-201ENST00000433967 325 ntBASIC6.14□□□□□ -1.43
UBE4BO95155 IGBP1P3-201ENST00000447449 1000 ntBASIC6.14□□□□□ -1.43
UBE4BO95155 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
UBE4BO95155 AC104109.1-201ENST00000498563 436 ntBASIC6.14□□□□□ -1.43
UBE4BO95155 PSMA2P2-201ENST00000504319 686 ntBASIC6.14□□□□□ -1.43
UBE4BO95155 SNORD46.2-201ENST00000516021 102 ntBASIC6.14□□□□□ -1.43
UBE4BO95155 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.14□□□□□ -1.43
UBE4BO95155 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.14□□□□□ -1.43
UBE4BO95155 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.14□□□□□ -1.43
UBE4BO95155 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.14□□□□□ -1.43
UBE4BO95155 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.14□□□□□ -1.43
UBE4BO95155 AC012146.2-201ENST00000576545 416 ntBASIC6.14□□□□□ -1.43
UBE4BO95155 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.14□□□□□ -1.43
UBE4BO95155 AL139124.1-201ENST00000609123 421 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms