Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SNORA64.1-201ENST00000362600 132 ntBASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 RNA5SP232-201ENST00000364144 119 ntBASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 RN7SKP171-201ENST00000364417 303 ntBASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AL354893.1-201ENST00000433735 348 ntBASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AL358876.1-201ENST00000453364 1075 ntBASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AC068228.1-201ENST00000461723 211 ntBASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 HSD3BP3-201ENST00000514706 994 ntBASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 HMGN1P9-201ENST00000515212 298 ntBASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 RNA5SP230-201ENST00000517039 122 ntBASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 FRG1EP-201ENST00000634469 770 ntBASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 LYARP1-201ENST00000436977 1501 ntBASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AC090181.3-201ENST00000624777 1514 ntBASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AL034549.2-201ENST00000618285 3373 ntBASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 RNU1-150P-201ENST00000362491 162 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 U3.7-201ENST00000363668 216 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 RNU6-316P-201ENST00000391027 107 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 PEX12P1-201ENST00000400284 1048 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 RPL7AP49-201ENST00000429522 581 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 AL591438.1-201ENST00000433508 581 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 AC090804.1-201ENST00000448870 490 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 AC068491.1-201ENST00000449539 1241 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 NPM1P28-201ENST00000492269 840 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 SNORA70.11-201ENST00000515987 138 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 SNORA70.13-201ENST00000516116 138 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 Y_RNA.667-201ENST00000516212 107 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 RNA5SP438-201ENST00000516561 112 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 SCARNA20.4-201ENST00000516969 131 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 CDC42P3-201ENST00000518493 633 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 AC079905.1-201ENST00000549280 475 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 CYCSP38-201ENST00000559840 322 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 AL359091.2-201ENST00000609303 556 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 AC025574.2-201ENST00000615621 514 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 AC073869.8-201ENST00000641806 335 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 CDY3P-201ENST00000454543 1618 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 Z83820.1-201ENST00000456978 1499 ntBASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM49D1C9J1S8 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 AC107977.1-201ENST00000355745 939 ntBASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 RNA5SP477-201ENST00000362639 119 ntBASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 AL358178.1-201ENST00000407698 397 ntBASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 RNU2-18P-201ENST00000411224 162 ntBASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 HMGB3P24-201ENST00000433260 622 ntBASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 OR52E3P-201ENST00000452083 936 ntBASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 AC022215.1-201ENST00000481770 362 ntBASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 RPS3AP15-201ENST00000483874 781 ntBASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 RN7SL649P-201ENST00000496974 275 ntBASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms