Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 RNA5SP477-201ENST00000362639 119 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 RN7SKP74-201ENST00000362849 309 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 RN7SKP78-201ENST00000364711 318 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 SUGT1P2-201ENST00000379452 992 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 AL354890.1-201ENST00000413730 346 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 AK4P4-201ENST00000419465 646 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 AC126120.1-201ENST00000431082 470 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 TCEA1P3-201ENST00000443005 880 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 OR7E116P-201ENST00000448529 957 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 MEMO1P4-201ENST00000453590 386 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 ACA64.1-201ENST00000459171 127 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 Y_RNA.667-201ENST00000516212 107 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 RN7SKP70-201ENST00000516655 271 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 AC006530.1-201ENST00000555980 571 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 FAM27E4-201ENST00000605259 342 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 AL162574.1-201ENST00000615702 950 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 MIR6133-201ENST00000617057 108 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 OR9K1P-202ENST00000641111 3217 ntBASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DRB4X5D2U9 MAPK10-328ENST00000641553 4009 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 RNA5SP273-201ENST00000362484 113 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 RN7SKP275-201ENST00000364626 301 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC087752.1-201ENST00000391360 558 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC110602.1-201ENST00000437414 318 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AL359839.1-201ENST00000451975 1160 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC093166.4-201ENST00000457867 318 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC023424.1-201ENST00000496058 459 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 SUMO2P4-201ENST00000504193 276 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 USP9YP2-201ENST00000504503 1000 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC074255.1-201ENST00000511259 501 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms