Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 U4.5-201ENST00000617137 123 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AC009948.3-201ENST00000603415 1798 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AC009135.2-201ENST00000624136 1768 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AC138627.1-203ENST00000641872 1680 ntBASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
ZC3H4Q9UPT8 NEPNP-201ENST00000404786 1371 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AC010132.4-201ENST00000569883 1368 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 TMEM75-201ENST00000624314 2165 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 RN7SKP275-201ENST00000364626 301 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 SNORA75-201ENST00000384158 137 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AL050335.1-201ENST00000396909 869 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 PSMA6P1-201ENST00000400275 741 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 VTA1P1-201ENST00000414044 866 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AC018804.1-201ENST00000430381 618 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 ATP5F1P1-201ENST00000433775 569 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 LYPLA1P1-201ENST00000434514 622 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 RPL23AP76-201ENST00000441860 458 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 ST13P20-201ENST00000447996 1065 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 MTND5P20-201ENST00000448677 143 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 EPS15P1-201ENST00000448836 336 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AC116337.2-201ENST00000477662 156 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AC109486.1-201ENST00000486833 374 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 CREM-242ENST00000490511 469 ntTSL 2 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 SNORA74.1-201ENST00000516320 180 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 SMARCE1P4-201ENST00000523647 241 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AP001207.1-201ENST00000524051 481 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 PPIAP6-201ENST00000557078 499 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 RPL29P33-201ENST00000587474 316 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AL021368.3-201ENST00000607119 578 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 Y_RNA.804-201ENST00000615262 101 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AL356321.1-201ENST00000621360 228 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 TEX41-256ENST00000626411 368 ntTSL 5 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 OR8B9P-202ENST00000642028 5216 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 LRRC37A17P-201ENST00000570311 4693 ntBASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ZC3H4Q9UPT8 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms