Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 VN1R21P-201ENST00000426703 765 ntBASIC5.58□□□□□ -1.52
CHD7Q9P2D1 TMEM183AP1-205ENST00000432739 290 ntBASIC5.58□□□□□ -1.52
CHD7Q9P2D1 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 IGKV1-32-201ENST00000519290 311 ntBASIC5.58□□□□□ -1.52
CHD7Q9P2D1 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 ERG-205ENST00000398910 4954 ntTSL 5 BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 HMGB3P7-201ENST00000400214 611 ntBASIC5.58□□□□□ -1.52
CHD7Q9P2D1 AL009179.1-201ENST00000406085 265 ntBASIC5.58□□□□□ -1.52
CHD7Q9P2D1 RN7SL604P-201ENST00000492589 296 ntBASIC5.58□□□□□ -1.52
CHD7Q9P2D1 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.58□□□□□ -1.52
CHD7Q9P2D1 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 AC119674.1-213ENST00000641177 1386 ntBASIC5.57□□□□□ -1.52
CHD7Q9P2D1 RN7SKP227-201ENST00000364445 330 ntBASIC5.57□□□□□ -1.52
CHD7Q9P2D1 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 RN7SL423P-201ENST00000486202 304 ntBASIC5.57□□□□□ -1.52
CHD7Q9P2D1 HMGN2P25-201ENST00000486956 268 ntBASIC5.57□□□□□ -1.52
CHD7Q9P2D1 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 DHX40P1-201ENST00000588725 1412 ntBASIC5.57□□□□□ -1.52
CHD7Q9P2D1 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 HSPD1P12-201ENST00000429127 1069 ntBASIC5.57□□□□□ -1.52
CHD7Q9P2D1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 TDGF1P1-201ENST00000445734 527 ntBASIC5.57□□□□□ -1.52
CHD7Q9P2D1 AC011005.3-201ENST00000491624 395 ntBASIC5.57□□□□□ -1.52
CHD7Q9P2D1 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 YWHABP2-201ENST00000540201 713 ntBASIC5.57□□□□□ -1.52
CHD7Q9P2D1 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 AC104447.1-201ENST00000624214 2124 ntBASIC5.57□□□□□ -1.52
CHD7Q9P2D1 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 ERG-210ENST00000442448 5034 ntTSL 5 BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHD7Q9P2D1 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 AL591848.1-201ENST00000413092 322 ntBASIC5.56□□□□□ -1.52
CHD7Q9P2D1 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 RNU1-88P-201ENST00000459274 128 ntBASIC5.56□□□□□ -1.52
CHD7Q9P2D1 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 AC009237.13-201ENST00000603193 276 ntBASIC5.56□□□□□ -1.52
CHD7Q9P2D1 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 AL589993.1-201ENST00000407450 2524 ntBASIC5.56□□□□□ -1.52
CHD7Q9P2D1 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms