Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 ATP5F1P3-201ENST00000397213 657 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 AC093655.2-201ENST00000425735 631 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 AC083829.1-201ENST00000503756 657 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 RN7SKP99-201ENST00000517028 307 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 AC125494.2-201ENST00000602431 657 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 AC095055.1-201ENST00000603472 1113 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 ZNF658B-201ENST00000602828 3408 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 RNU2-50P-201ENST00000410494 143 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 AL357752.1-201ENST00000412817 349 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 CDY14P-201ENST00000431260 1014 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 CDY12P-201ENST00000440679 1015 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 CDY13P-201ENST00000445813 1015 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 AC105399.1-202ENST00000447303 205 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 CDY23P-201ENST00000451661 1014 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 AC099676.1-201ENST00000608886 657 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 AC024023.1-201ENST00000624530 922 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 NEK2P4-201ENST00000425793 1329 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 AL512310.3-201ENST00000547023 1335 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 AC073365.1-203ENST00000641055 1992 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 OR8B9P-202ENST00000642028 5216 ntBASIC5.24□□□□□ -1.57
CHD8Q9HCK8 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 AL162456.1-201ENST00000634535 2006 ntBASIC5.23□□□□□ -1.57
CHD8Q9HCK8 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 PTCD2P2-201ENST00000415579 1095 ntBASIC5.23□□□□□ -1.57
CHD8Q9HCK8 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 AC020593.1-201ENST00000507399 299 ntBASIC5.23□□□□□ -1.57
CHD8Q9HCK8 SNORA67.7-201ENST00000516664 135 ntBASIC5.23□□□□□ -1.57
CHD8Q9HCK8 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 AL356752.1-201ENST00000615844 593 ntBASIC5.23□□□□□ -1.57
CHD8Q9HCK8 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 AC105114.1-201ENST00000624795 1862 ntBASIC5.23□□□□□ -1.57
CHD8Q9HCK8 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 RNA5SP432-201ENST00000362480 116 ntBASIC5.23□□□□□ -1.57
CHD8Q9HCK8 CHIAP3-201ENST00000423668 1133 ntBASIC5.23□□□□□ -1.57
CHD8Q9HCK8 ACA64.4-201ENST00000459070 127 ntBASIC5.23□□□□□ -1.57
CHD8Q9HCK8 AC021678.3-201ENST00000517893 476 ntBASIC5.23□□□□□ -1.57
CHD8Q9HCK8 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 AL391358.1-201ENST00000605342 190 ntBASIC5.23□□□□□ -1.57
CHD8Q9HCK8 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 AC139713.2-214ENST00000642059 1811 ntBASIC5.23□□□□□ -1.57
CHD8Q9HCK8 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
CHD8Q9HCK8 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 NIFKP3-201ENST00000417799 865 ntBASIC5.22□□□□□ -1.57
CHD8Q9HCK8 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms