Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
BRF2Q9HAW0 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
BRF2Q9HAW0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
BRF2Q9HAW0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.71□□□□□ -1.49
BRF2Q9HAW0 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 SNORA79B-201ENST00000410557 148 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 FAM183DP-201ENST00000421987 399 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC023141.6-201ENST00000429418 337 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 GAPDHP59-201ENST00000435908 267 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 DNAJC19P5-201ENST00000443295 316 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 RPS7P3-201ENST00000443360 580 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 RPL5P7-201ENST00000444235 813 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 REG1CP-206ENST00000447469 496 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 snoU13.29-201ENST00000459370 104 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 RPL5P13-201ENST00000462840 709 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC106822.1-201ENST00000502647 526 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AP003033.2-201ENST00000528901 805 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 OR4R2P-201ENST00000530815 597 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AP000619.2-201ENST00000546014 969 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC092332.1-201ENST00000563684 829 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AL135786.2-201ENST00000608422 615 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AP002371.2-201ENST00000624450 503 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC073488.3-201ENST00000631611 778 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 RBPJP7-201ENST00000442803 1447 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 RBPJP5-201ENST00000449433 1447 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AL121950.1-201ENST00000624993 2077 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 SMG1P7-201ENST00000565246 2704 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC012254.3-201ENST00000591183 2117 ntBASIC5.71□□□□□ -1.5
BRF2Q9HAW0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.71□□□□□ -1.5
BRF2Q9HAW0 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AL512283.1-201ENST00000606756 1384 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC020633.1-201ENST00000468439 2247 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 RAD1P1-201ENST00000231383 813 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC104297.1-201ENST00000393779 870 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 RBBP4P5-201ENST00000398583 1266 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 OR2W4P-201ENST00000406496 926 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 Z86062.1-201ENST00000406773 777 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AL359885.1-201ENST00000415786 903 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AL590399.2-201ENST00000427536 309 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AL445928.1-201ENST00000435545 222 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms