Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 PTGES3P1-201ENST00000439531 483 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 MTCYBP3-201ENST00000445588 1137 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AC023245.1-201ENST00000468501 517 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 RN7SL390P-201ENST00000470634 284 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AC008837.1-201ENST00000511513 412 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 RNA5SP278-201ENST00000517055 102 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AC104417.1-201ENST00000523974 751 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 PDCL2P2-201ENST00000533651 189 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AL445383.1-201ENST00000554689 874 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 MIR4301-201ENST00000577203 66 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 MIR4312-201ENST00000579909 76 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AP003465.2-201ENST00000602571 373 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AC022001.1-201ENST00000605193 268 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AC068944.2-201ENST00000610373 403 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AC005277.2-201ENST00000617898 390 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AL354702.2-202ENST00000641481 890 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 HSPD1P11-201ENST00000508643 1702 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 CASC19-281ENST00000642118 1554 ntBASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SEC61A2Q9H9S3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 UBE2Q2P1-202ENST00000354771 883 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 SNORD56.4-201ENST00000363883 71 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC019178.1-201ENST00000392337 440 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AL096711.1-201ENST00000404780 554 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC129850.1-201ENST00000436203 508 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 MTATP6P23-201ENST00000440153 476 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 PMS2P9-201ENST00000441237 515 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 CRYGGP-201ENST00000443337 145 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 HMGB3P6-201ENST00000444896 598 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 RPL7AP71-201ENST00000451120 739 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC234781.3-201ENST00000452540 973 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 RPSAP24-201ENST00000461543 873 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC063955.1-201ENST00000462872 685 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 RPS7P7-201ENST00000463499 571 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 RPL23AP80-201ENST00000495605 424 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 OR5H4P-201ENST00000510851 923 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC008549.1-201ENST00000512900 643 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 IGKV2D-38-201ENST00000518423 240 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC087752.2-201ENST00000521219 281 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 KCTD9P6-201ENST00000522306 950 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 OR5AM1P-201ENST00000532136 1032 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 ELOCP32-201ENST00000548625 324 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms