Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 CR383658.2-201ENST00000547576 1525 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 CASC19-243ENST00000641588 1546 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 OR9G4-201ENST00000302957 984 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 RNA5SP301-201ENST00000362537 121 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 RNA5SP483-201ENST00000363431 118 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 RNA5SP105-201ENST00000391123 113 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 RN7SKP59-201ENST00000410520 314 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 PIGPP2-201ENST00000411569 458 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 USP9YP6-201ENST00000413550 854 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 RPL21P32-201ENST00000419877 477 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 OR8F1P-201ENST00000425243 930 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC130472.1-201ENST00000427885 309 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 USP12PX-201ENST00000432383 1057 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AL731892.1-201ENST00000437364 1192 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 CYP2C56P-201ENST00000440076 291 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 DNAJC19P4-201ENST00000440115 345 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AL662791.1-201ENST00000441992 928 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC002553.1-201ENST00000442828 802 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 RPS26P30-201ENST00000443431 335 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 RPSAP49-201ENST00000445182 886 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 USP9YP34-201ENST00000453983 808 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC022730.2-201ENST00000465359 452 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC127024.1-201ENST00000490847 418 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC006070.1-201ENST00000508151 193 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 ST13P6-201ENST00000522430 1102 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 GTF2IP22-201ENST00000554443 182 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 RN7SL835P-201ENST00000579920 262 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 OR5AH1P-201ENST00000595968 283 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC004836.1-201ENST00000623032 634 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AL596275.2-203ENST00000641951 371 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 SOCS5P5-201ENST00000402732 1586 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 AC138915.4-201ENST00000565549 4147 ntBASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.93□□□□□ -1.3
BHLHE41Q9C0J9 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AL162171.3-201ENST00000617439 3178 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 VEZF1P1-201ENST00000423931 1541 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms