Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM4Q9C037 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM4Q9C037 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM4Q9C037 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM4Q9C037 RN7SKP292-201ENST00000365522 317 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 MIR585-201ENST00000384887 94 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 AC138761.5-201ENST00000433967 325 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 AC094019.1-201ENST00000434678 472 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 MED28P3-201ENST00000444288 531 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 MORF4-201ENST00000447135 971 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 PPIAP7-201ENST00000454070 489 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 RPS4XP12-201ENST00000461747 709 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 RPSAP37-201ENST00000470913 821 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 RN7SL714P-201ENST00000487050 298 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 OR5M14P-201ENST00000506803 618 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 Y_RNA.667-201ENST00000516212 107 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 AP000620.1-201ENST00000527147 504 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 AC010547.6-201ENST00000571789 193 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 COX6CP7-201ENST00000597056 208 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 AC027334.1-201ENST00000603257 310 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM4Q9C037 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 AC118658.2-201ENST00000618697 459 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 AC003992.1-201ENST00000635364 557 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 AL353796.1-201ENST00000561542 3241 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 CASC19-238ENST00000641523 1558 ntBASIC5.88□□□□□ -1.47
TRIM4Q9C037 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
TRIM4Q9C037 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM4Q9C037 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM4Q9C037 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM4Q9C037 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM4Q9C037 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 RNA5SP273-201ENST00000362484 113 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 RNU1-19P-201ENST00000363306 165 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 RN7SKP151-201ENST00000410230 316 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 RN7SKP121-201ENST00000410842 305 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 EMC3-AS1-205ENST00000438698 534 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 AL353662.1-201ENST00000439099 327 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM4Q9C037 AC016908.1-201ENST00000442571 1219 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 AC073594.1-201ENST00000462065 364 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 RN7SL799P-201ENST00000475891 298 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 RN7SL369P-201ENST00000477138 299 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 AC093270.2-201ENST00000486157 792 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 OR6M2P-201ENST00000529831 871 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 AP001858.2-201ENST00000536213 601 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 MIR4701-201ENST00000583094 63 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 CASC19-248ENST00000641674 1356 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM4Q9C037 AL132656.3-201ENST00000606384 1595 ntBASIC5.87□□□□□ -1.47
TRIM4Q9C037 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM4Q9C037 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM4Q9C037 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
TRIM4Q9C037 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM4Q9C037 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM4Q9C037 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms